PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028055999.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

GeBP

Protein Properties

Length: 399aa MW: 44945.2 Da PI: 4.8609

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028055999.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	122.3	2.3e-38	166	257	3	97
DUF573 3 fqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97 ++rlw+e+Dei++L+G+i+f++k+g++p++d+ af+ef+kks+ ++vsk+qlv+K+rrLKkK++ + +k g++p+fsk+h+ k+felskkiWg XP_028055999.1 166 INRLWNEDDEITVLKGMIEFQSKKGSEPHADMGAFHEFIKKSLRADVSKNQLVDKVRRLKKKYQINAEK---GEDPTFSKPHELKTFELSKKIWG 257 68****************************************************************9...********************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 399 aa Download sequence
MAQRRLSAME NPPSASSSED ESEEINDKEV DPKQNPNVES QEDEDEEEES DDEEEEESDE 60 EKDKKKPSEP DSSSDSEESD PEVHSADTQP SPSASDFTIK PIASKPMLDS TKPKKPPSKP 120 ATPPSKLSKR LAEIDPNNGK DSQKKKVKVS NGDEKDGAVE EKKFTINRLW NEDDEITVLK 180 GMIEFQSKKG SEPHADMGAF HEFIKKSLRA DVSKNQLVDK VRRLKKKYQI NAEKGEDPTF 240 SKPHELKTFE LSKKIWGNGG ASNAVDDNAP KNEAKKSRKR IKVNNSAPSP KEVRKELVLP 300 EASKVEAKDP VPDQKEFWVT FPCLKESLEL KEYSTFSMPE LGKNLLKDGM STIGSAKAME 360 LEEKWKIFRQ EEVALYLKRT ELIQEQTKLI LDAMKSAKP

Sequence ? help Back to Top

Protein Sequence Length: 399 aa Download sequence

MAQRRLSAME NPPSASSSED ESEEINDKEV DPKQNPNVES QEDEDEEEES DDEEEEESDE  60
EKDKKKPSEP DSSSDSEESD PEVHSADTQP SPSASDFTIK PIASKPMLDS TKPKKPPSKP  120
ATPPSKLSKR LAEIDPNNGK DSQKKKVKVS NGDEKDGAVE EKKFTINRLW NEDDEITVLK  180
GMIEFQSKKG SEPHADMGAF HEFIKKSLRA DVSKNQLVDK VRRLKKKYQI NAEKGEDPTF  240
SKPHELKTFE LSKKIWGNGG ASNAVDDNAP KNEAKKSRKR IKVNNSAPSP KEVRKELVLP  300
EASKVEAKDP VPDQKEFWVT FPCLKESLEL KEYSTFSMPE LGKNLLKDGM STIGSAKAME  360
LEEKWKIFRQ EEVALYLKRT ELIQEQTKLI LDAMKSAKP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G61730.1	3e-31	GeBP family protein