PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028055990.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

bHLH

Protein Properties

Length: 290aa MW: 32309.5 Da PI: 8.1373

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028055990.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	38.6	1.9e-12	169	216	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 + h +Er+RR+++ ++f L l+P + kKl+ a++L A++YIk+Lq XP_028055990.1 169 QDHVVAERKRREKLSQRFIALSALVPGL-----KKLDNASVLGNAIKYIKELQ 216 56999*********************.....9****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 290 aa Download sequence
MEEPAVIHQC QMNSLNHSVH EIISLSSETY STTSYPYFYP KSTPFQTSQM ASSMIAKPEA 60 KQLKPNDWNS HKNNEKFKPP NPKAFSSSSS SSKFISFANS NAAPPDCSKQ LHGNVNCTLK 120 SKANSNTNMK FSFILSQNSN EIPLEFGGVE TQRVCTTNTT ATRTPLQAQD HVVAERKRRE 180 KLSQRFIALS ALVPGLKKLD NASVLGNAIK YIKELQEHVK KHEDETKKNP VESIVCVKKS 240 WLSEEDDFDM SCTQVLPEVA MDPQFSMIAN DLAKGLRSAI QDVLISPPPE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	175	180	ERKRRE
2	176	181	RKRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37850.1	2e-28	bHLH family protein