PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028055876.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | ERF | ||||||||
Protein Properties | Length: 239aa MW: 26435.1 Da PI: 5.0044 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 58.4 | 1.8e-18 | 72 | 121 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GVrw++ + +Wv+e+r+p +k+ r++lg+f tae+Aa+a++ a+ +l+g XP_028055876.1 72 VYRGVRWRS-NSKWVCEVREP---NKKSRIWLGTFPTAEMAARAHDVAAIALRG 121 59******9.8******9998...347*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 239 aa Download sequence |
MDLDMEIDMF SHFSDPLPSF WSNNVPESPS VSDCGSGAGP AARFSDEEVL LASSCPKKRG 60 GRKKVRETRH QVYRGVRWRS NSKWVCEVRE PNKKSRIWLG TFPTAEMAAR AHDVAAIALR 120 GRLACLNFAD SVWKLPIPAS LKPTDIQKAA TEAAEAFRPS LQYLEVSGDV TKPENVPATM 180 PEKILYVDEE AVFGMPGFLA NMSEGLMIPP LLPHCAGGEW YQGDDVEAFD DVALWSFSI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G51990.1 | 5e-70 | ERF family protein |