PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028055836.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | ERF | ||||||||
Protein Properties | Length: 219aa MW: 23570 Da PI: 9.5376 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 52.6 | 1.1e-16 | 77 | 124 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++G+r ++ +g+Wv+eIr+p++ ++r++lg++ t+e+Aa+a++aa+++l+g XP_028055836.1 77 FRGIR-CR-SGKWVSEIREPRK---TTRVWLGTYPTPEMAAAAYDAAALALKG 124 89**9.55.6*********843...5************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 219 aa Download sequence |
MFFPFKCMAN SANVGQIDQR PDSSLTLLPQ LQHPNNSPLA TTTTCQQHPS PKPPLPRTTP 60 IPSPSIGGAT SGKHHNFRGI RCRSGKWVSE IREPRKTTRV WLGTYPTPEM AAAAYDAAAL 120 ALKGPDAALN FPESLLSYPV AASSSASDVR AAAAAAAAAA ARLPKQSGPV ENTCQTRTDS 180 GQAFFMDDEE IFDMPNLLVD MAKGMLMSPP RMIKKKLMY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G52020.1 | 2e-31 | ERF family protein |