PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028055808.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | LBD | ||||||||
Protein Properties | Length: 123aa MW: 13504.3 Da PI: 6.3351 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 58 | 2.7e-18 | 5 | 58 | 47 | 100 |
DUF260 47 kalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallkee 100 ++lp ++r da+ss+vyeA+ar+rdPvyG+vg i++lqqq++ l+++lal+++e XP_028055808.1 5 AELPMHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDLLQTQLALAQAE 58 57899********************************************99976 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 123 aa Download sequence |
MTRQAELPMH QRGDAVSSMV YEANARVRDP VYGCVGAISS LQQQIDLLQT QLALAQAEVV 60 HMRMRHFSLS MSSASTDSPD NNNSPPPPPS SKLMSSSHQT KSLFNMDAMV VDHPNMGESL 120 WSC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G31320.1 | 1e-23 | LBD family protein |