PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028055755.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family GRAS
Protein Properties Length: 435aa    MW: 48538.5 Da    PI: 5.1814
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028055755.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS282.21.5e-86454282373
            GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalkl..fsevsPilkfs 94 
                     ++lLl+cA a++s+d +laq++++ l++ as  gdp+qRl++ f++AL +r +r +++ ++   +++     + + +++++l  ++++ P+++f+
  XP_028055755.1  45 EKLLLHCASALESNDVTLAQQVMWVLNNVASAVGDPNQRLTSWFLRALISRASRVCPTAMNFNGSNTL---LQRRLMSVTELagYVDLIPWHRFG 136
                     689***************************************************77766654433333...2444444444577*********** PP

            GRAS  95 hltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg...skeeleetgerLakfAeelgvpfefnvl..... 181
                     + + N+aI +a+eg+ +vHi+Df+i++++QWp+L++aL +R++gppslRi + +   ++    + + ee+g rLa+fA+  +v fefnv+     
  XP_028055755.1 137 FCASNSAIFKAIEGCPKVHILDFSITHCMQWPTLIDALGKREGGPPSLRISVPSWRPHVpplLNVSSEEVGLRLANFAKLREVLFEFNVIedhts 231
                     ***************************************************988855558899999**************************999 PP

            GRAS 182 .........vakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysal 267
                              + + l++l++ +L+++ +E+l++n++  + +l+de++  +   d++L+++k+l+P+++++v++++d++++s+  r++ +++y +  
  XP_028055755.1 232 sseesssfhYDSFLSKLNPATLNLRDDEVLVINCQNWIRYLPDEQQGCAR--DAFLEIIKGLNPRIIIIVDEDSDLGASSLTSRITTCFNYLWIP 324
                     99988887555578999*************************88888877..******************************************* PP

            GRAS 268 fdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgW 362
                     fd+le+ lp++s +ri +E+  +g +i+n++  eg +r+er e+  k  +r++++ F +vp++e+++ ++klll +++  g+ ++++++ lvl+W
  XP_028055755.1 325 FDALETFLPKDSAQRIEYEAD-IGHKIENIIGFEGIQRIERLESGIKLCQRMKNSCFLSVPFDEETVGEVKLLLDEHA-SGWGMKKDEDMLVLTW 417
                     *********************.********************************************************.8899************ PP

            GRAS 363 kdrpLvsvSaW 373
                     k+++ v ++aW
  XP_028055755.1 418 KGHNTVYATAW 428
                     *********** PP
Sequence ? help Back to Top
Protein Sequence    Length: 435 aa     Download sequence    
MKTELRGTRT TPISLQNPSL LSSAQSSLSG ALKGCLGSLD GGCIEKLLLH CASALESNDV  60
TLAQQVMWVL NNVASAVGDP NQRLTSWFLR ALISRASRVC PTAMNFNGSN TLLQRRLMSV  120
TELAGYVDLI PWHRFGFCAS NSAIFKAIEG CPKVHILDFS ITHCMQWPTL IDALGKREGG  180
PPSLRISVPS WRPHVPPLLN VSSEEVGLRL ANFAKLREVL FEFNVIEDHT SSSEESSSFH  240
YDSFLSKLNP ATLNLRDDEV LVINCQNWIR YLPDEQQGCA RDAFLEIIKG LNPRIIIIVD  300
EDSDLGASSL TSRITTCFNY LWIPFDALET FLPKDSAQRI EYEADIGHKI ENIIGFEGIQ  360
RIERLESGIK LCQRMKNSCF LSVPFDEETV GEVKLLLDEH ASGWGMKKDE DMLVLTWKGH  420
NTVYATAWAP CVFED
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49950.11e-122GRAS family protein