PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028054955.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family GRAS
Protein Properties Length: 645aa    MW: 71926.9 Da    PI: 5.2718
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028054955.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS417.31.3e-1272636291373
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     l++lL++c++a+ s++ +++++++a+l +lasp+g p+ R++ayfteALa r++r ++ ++++ +p+e + +  ++  ++l+l+++vsPi+kf h
  XP_028054955.1 263 LIRLLMACVKAIGSKNIAEINHFIAKLGDLASPRGPPISRVIAYFTEALALRVTRLWPYVFHINTPRELD-RGDDDGGNSLRLLNQVSPIPKFIH 356
                     5799**********************************************************99999997.5678888999************** PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledle 190
                     +t N+ +l+a+eg++rvHiiDfdi+qGlQWp+L+q+LasR+++p ++RiTg+g+    sk+ l etg+rLa fAe+l++pfef++ v++rled++
  XP_028054955.1 357 FTSNEILLRAFEGKDRVHIIDFDIKQGLQWPSLFQSLASRTNPPSHVRITGIGE----SKQDLIETGDRLAGFAEALNLPFEFHP-VVDRLEDVR 446
                     ******************************************************....9**************************.7******** PP

            GRAS 191 leeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikv 285
                     l++L+vk++E++aVn+++qlh++l +        +++L l++s++P++vv++eqea+hn++s+ er++++l+yys++fds++++l+ +s  rikv
  XP_028054955.1 447 LWMLHVKEKESVAVNCIFQLHKMLYDGSGGV--LRDFLGLIRSTNPTIVVMAEQEAEHNDTSLEERLSNSLKYYSSIFDSFDSSLALDSLVRIKV 539
                     ***********************96544433..479*********************************************************** PP

            GRAS 286 ErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveee...sgslvlgWkdrpLvsvSaW 373
                     E++ ++rei+n++aceg++r erhe+++kWr+ +e+ GF+ + ++e++  q ++ll++++ + y+ve++    ++++l W d+pL++vS W
  XP_028054955.1 540 EEM-FSREIRNIIACEGRDRLERHERFAKWRNLMEQGGFRCMGINERELLQSQMLLKMYSCESYSVEKQgqdGDAVMLSWLDQPLFTVSGW 629
                     ***.********************************************************999****6544266777************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 645 aa     Download sequence    
MLAGRSSALL SPRHRLRSEA SAQFQACHFP SMSTQRLELP CSFPRKDTSR SQPIRPVGLS  60
VEKPLESKTS SCSLKHNIIE GRREIKDEFW EKGKSLKRFA EQSSLDGEDD DQYCINRAKR  120
KRGNGKSEDC HESGEELSLG QLGIGKFWFQ PQYPFPVTCS GEEERVCFVP SDVISPSLPL  180
SIAPWVESVE TTSHGPAQEA SGSSTSSESS HSLALSLNDN FPGHETGNGS GASGLPNPSE  240
GAEMVVSGDN DNCGDEESDG FELIRLLMAC VKAIGSKNIA EINHFIAKLG DLASPRGPPI  300
SRVIAYFTEA LALRVTRLWP YVFHINTPRE LDRGDDDGGN SLRLLNQVSP IPKFIHFTSN  360
EILLRAFEGK DRVHIIDFDI KQGLQWPSLF QSLASRTNPP SHVRITGIGE SKQDLIETGD  420
RLAGFAEALN LPFEFHPVVD RLEDVRLWML HVKEKESVAV NCIFQLHKML YDGSGGVLRD  480
FLGLIRSTNP TIVVMAEQEA EHNDTSLEER LSNSLKYYSS IFDSFDSSLA LDSLVRIKVE  540
EMFSREIRNI IACEGRDRLE RHERFAKWRN LMEQGGFRCM GINERELLQS QMLLKMYSCE  600
SYSVEKQGQD GDAVMLSWLD QPLFTVSGWA PVDVAASSSS YSQPT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G63100.10.0GRAS family protein