PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028054811.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 661aa MW: 76378.8 Da PI: 8.3227

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028054811.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	61.4	2.8e-19	92	185	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..tekerrtraetrtgCkaklkvkkek....dgkwevtkleleHnHela 90 fYn+YAk GFs+rksk +++ ++g++++r + Cs+eg+r ++ + +ek+r ++a tr+g ka+++++ + +k++vt+++ eHnHel+ XP_028054811.1 92 FYNAYAKAKGFSIRKSKFNTN-KEGKVVNRLWLCSREGQRLPKYLErvAEKSRAPKALTRVGYKAQFRIRYNAdageGEKYVVTHFVAEHNHELV 185 9**************9998.6666999*******99988877899999************998777779************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 661 aa Download sequence
MAPAEVKREG DDYDIPNEAD DIHLINESRA KHYHGYEAGP SNEETTNMNV EDGGADVKQE 60 MVDDAHRNDM VGDVERAILE QKFDLVEDGE AFYNAYAKAK GFSIRKSKFN TNKEGKVVNR 120 LWLCSREGQR LPKYLERVAE KSRAPKALTR VGYKAQFRIR YNADAGEGEK YVVTHFVAEH 180 NHELVEQHCV IYLRSHRGLN SADKAQAMAM RNVGMKTSQI MDYMVNQSGS YENVGFIRTD 240 LHNHIQAEHR AKIEEGEVQG ALVYLCAKLD VDTRFFYKYD VCKDKKLQNL FWADSKSRAN 300 YTKFSDVLTF DSTYRTNVYK KPFVMLADVT NHFRTMIFAC VLLANKTIDT YTWVLETFME 360 AMANKAPVSI LTDGDKAMRE AIRRVFLDAR HQLCNWHLRK NVVSNVHKSG FAHAFKQCMD 420 METDEAKFED GWTRMVEKFG LQTNSWVLET YEKRHMWAKS YMRGHFFAGM KSTQRSEKRH 480 GAELFTRNIF RMFRDEIVEE GKLNVNDVFP LSDGQKCYYI HKYEVKDRSW IVTHNPVDAK 540 MRCSCMKFES LGLPCCHMIC VMKAKNLTQI PPTCVLHRWT RAASKNGQQW PQPSIDSTTT 600 QTARYGILSS AYNEMCFYAS QSTKGFKEAR DACLPMTSWM KELYERNLNN GDGDKGKHSI 660 P

Sequence ? help Back to Top

Protein Sequence Length: 661 aa Download sequence

MAPAEVKREG DDYDIPNEAD DIHLINESRA KHYHGYEAGP SNEETTNMNV EDGGADVKQE  60
MVDDAHRNDM VGDVERAILE QKFDLVEDGE AFYNAYAKAK GFSIRKSKFN TNKEGKVVNR  120
LWLCSREGQR LPKYLERVAE KSRAPKALTR VGYKAQFRIR YNADAGEGEK YVVTHFVAEH  180
NHELVEQHCV IYLRSHRGLN SADKAQAMAM RNVGMKTSQI MDYMVNQSGS YENVGFIRTD  240
LHNHIQAEHR AKIEEGEVQG ALVYLCAKLD VDTRFFYKYD VCKDKKLQNL FWADSKSRAN  300
YTKFSDVLTF DSTYRTNVYK KPFVMLADVT NHFRTMIFAC VLLANKTIDT YTWVLETFME  360
AMANKAPVSI LTDGDKAMRE AIRRVFLDAR HQLCNWHLRK NVVSNVHKSG FAHAFKQCMD  420
METDEAKFED GWTRMVEKFG LQTNSWVLET YEKRHMWAKS YMRGHFFAGM KSTQRSEKRH  480
GAELFTRNIF RMFRDEIVEE GKLNVNDVFP LSDGQKCYYI HKYEVKDRSW IVTHNPVDAK  540
MRCSCMKFES LGLPCCHMIC VMKAKNLTQI PPTCVLHRWT RAASKNGQQW PQPSIDSTTT  600
QTARYGILSS AYNEMCFYAS QSTKGFKEAR DACLPMTSWM KELYERNLNN GDGDKGKHSI  660
P

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-85	FAR1 family protein