PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028054703.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | FAR1 | ||||||||
Protein Properties | Length: 178aa MW: 20799.9 Da PI: 8.3927 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 76.3 | 6.1e-24 | 35 | 119 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 +fYn+Y++++ Fs+r+++skk+k + + ++r +vC+keg+++ ++++ + aetrtgC+a+l vk++k +gk++vt++e++HnH+l+ XP_028054703.1 35 DFYNAYGERMRFSIRRDYSKKNKFTSQLICRLLVCNKEGFQKVNERD------PLAETRTGCEARLYVKLDKcTGKFVVTDFEEKHNHDLV 119 6****************************************998766......************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 178 aa Download sequence |
MAFQFRFDMD MEIENDCAWK PKQRMTFDLE QCVYDFYNAY GERMRFSIRR DYSKKNKFTS 60 QLICRLLVCN KEGFQKVNER DPLAETRTGC EARLYVKLDK CTGKFVVTDF EEKHNHDLVS 120 PKCAHMLPSQ RKITAIQAIE LDLAAQSGLR LGQSFELMGR EDGRGHCLGF TKSDKKII |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 3e-20 | FAR1 family protein |