PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028054623.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 203aa    MW: 23452.3 Da    PI: 6.5178
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028054623.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR143.21.3e-1349133289
            FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 
                     fY +YAk++ F +  ++++ + ++ge++     C+   +r+++ +   +  +++ +++++Cka+++ +++++g++++t+++leH+H+l
  XP_028054623.1  49 FYAKYAKQLEFAIAYRTQNVT-TDGEVKYFGIECTWARNRTKRLEV--NPLEPSLSSKIDCKARVRASLQTNGRYKLTTVVLEHTHDL 133
                     9************99988877.8999*********99999988766..9999**********************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 203 aa     Download sequence    
MDIDSNNNSF NVSEEVEEHD NNLEFNESDE VEEPKKGMYF NSKQEVYAFY AKYAKQLEFA  60
IAYRTQNVTT DGEVKYFGIE CTWARNRTKR LEVNPLEPSL SSKIDCKARV RASLQTNGRY  120
KLTTVVLEHT HDLILTDSQH FAMNKRILTS VKRRLEVNDA AGIGVARNFH SIVVEAGGYE  180
TLMFDERDAR NYKLHVRCSP QKL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18590RNRTKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.13e-15FAR1 family protein