PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028054562.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family ERF
Protein Properties Length: 429aa    MW: 46479.5 Da    PI: 6.6418
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028054562.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.71.9e-20206255255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+W+AeIrdp     +  +r++lg+f+tae Aa+a+++a+++++g
  XP_028054562.1 206 RYRGVRQRP-WGKWAAEIRDP-----HkaARVWLGTFDTAEAAARAYDEAALRFRG 255
                     59*******.**********7.....337*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 429 aa     Download sequence    
MCLSKVANPG DTGEFVRFPA SETTDEGGPY YHQAQPQQEE EEQQQTTMFS GYSRPREESA  60
VVTALTHVVS GRRPGERGYR PELRGAATTS FVGSSGIYSP SNSASPGYSS SSSGSWVGQK  120
RGREEVSVTQ NQYSEQLHRV YRGFSDLRAS PHGDSSSITT AAEEPTTNIV TTTSTTIPST  180
TITTTTQTPP TAVTASNEET RERRIRYRGV RQRPWGKWAA EIRDPHKAAR VWLGTFDTAE  240
AAARAYDEAA LRFRGNRAKL NFPENVRLLP PLQLSQTTQI PISNSPTTHH FPATQSQPPP  300
VFFQPQQFQT SDTARDYWEY SQLLRSTGDF QPTSSLEQMF YASPSSASSL AGLNSQSLAS  360
SSSPSFAADS SVTSSNSSYP PFFSDQQMGY FLPPGNRNQG GGGGGSSGGP VFEPPSWPGG  420
SGQYPPSSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50080.12e-23ERF family protein