PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028054263.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

bHLH

Protein Properties

Length: 443aa MW: 49334.1 Da PI: 6.5135

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028054263.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	30.6	5.9e-10	253	300	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +k Ka +L + ++Y++sLq XP_028054263.1 253 SHSLAERVRREKISERMKYLQDLVPGC----NKITGKAGMLDEIINYVQSLQ 300 8************************....999***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 443 aa Download sequence
MNRALPEMLH CLNTPGNLSG SSADLSVLER QRARIKCQQE LLLHHQQLQQ QQQQQQRYFE 60 GNELNSVFSL PAQGQQFQGG DHMSLNELMT RTVKTDPGME SGWADFGQFT GDFGFGSGFE 120 MNYGLSRTTS CPAAAISEVP VTATAVTEAK QRDSSVLPEK MSFKKRKAEK NHNLKAVAEE 180 EACKEKRIRR CTEEGESKIT EQNSDNDSKN TSNNNNNKRE TSADTSKENS KVSEVQKPDY 240 IHVRARRGQA TDSHSLAERV RREKISERMK YLQDLVPGCN KITGKAGMLD EIINYVQSLQ 300 RQVEFLSMKL AAVNPTLDFN IDNFVAKEVF SACTSNFPIG VSSEIANPAY LQFNPLQQIV 360 SCSGLEMGIN APDMALRRTI SAAVSSPETF LDSSCFNHIQ SSSAWEANLH NLHGVEFLQG 420 RSPSFQAQQF TGSNEASNLK MEI

Sequence ? help Back to Top

Protein Sequence Length: 443 aa Download sequence

MNRALPEMLH CLNTPGNLSG SSADLSVLER QRARIKCQQE LLLHHQQLQQ QQQQQQRYFE  60
GNELNSVFSL PAQGQQFQGG DHMSLNELMT RTVKTDPGME SGWADFGQFT GDFGFGSGFE  120
MNYGLSRTTS CPAAAISEVP VTATAVTEAK QRDSSVLPEK MSFKKRKAEK NHNLKAVAEE  180
EACKEKRIRR CTEEGESKIT EQNSDNDSKN TSNNNNNKRE TSADTSKENS KVSEVQKPDY  240
IHVRARRGQA TDSHSLAERV RREKISERMK YLQDLVPGCN KITGKAGMLD EIINYVQSLQ  300
RQVEFLSMKL AAVNPTLDFN IDNFVAKEVF SACTSNFPIG VSSEIANPAY LQFNPLQQIV  360
SCSGLEMGIN APDMALRRTI SAAVSSPETF LDSSCFNHIQ SSSAWEANLH NLHGVEFLQG  420
RSPSFQAQQF TGSNEASNLK MEI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G34530.1	2e-64	bHLH family protein