PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028053907.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | ERF | ||||||||
Protein Properties | Length: 243aa MW: 26719.2 Da PI: 6.6854 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 57.5 | 3.4e-18 | 130 | 181 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GVr+++ +g+++AeIrdp + k r++lg+f+ a eAa+a++ a+ k++g XP_028053907.1 130 SHYRGVRRRP-WGKFAAEIRDP---NrKGCRVWLGTFDAAVEAARAYDCAAFKMRG 181 79********.**********9...5466*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 243 aa Download sequence |
MTATATDDEL VLERIRQHLL GEFTSTQSFI TNLNFSNSSH HHDSILDIKP IFSSQKSDLS 60 VSSSGSGSDS NSNSNSSLIY LNPDLDFSDY ESKPEIADLS PSLNVSVQKL KTNESGSGPS 120 GLNGDEAERS HYRGVRRRPW GKFAAEIRDP NRKGCRVWLG TFDAAVEAAR AYDCAAFKMR 180 GSKAILNFPL DAGKSDPPVS TGRKRWSEGG AERSEERRRR ESDSSRRNVT TYSDGDGVFN 240 GVM |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 203 | 220 | RKRWSEGGAERSEERRRR |
2 | 216 | 221 | ERRRRE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G07580.1 | 7e-40 | ERF family protein |