PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028053668.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

CPP

Protein Properties

Length: 902aa MW: 98430.2 Da PI: 5.1655

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028053668.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	43.3	7.1e-14	533	570	3	40
TCR 3 kkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 + +CnCkkskClk+YC+C aag +C+e+C+C++C+N+ XP_028053668.1 533 CIHCNCKKSKCLKLYCDCLAAGIYCDETCTCQECFNRL 570 679*********************************85 PP
2	TCR	46.9	5.3e-15	620	658	1	39
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 ++k+gCnCkks C kkYCeC++a++ Cs C+Ce+CkN XP_028053668.1 620 RHKRGCNCKKSMCSKKYCECYQANVGCSTGCRCEGCKNV 658 589***********************************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 902 aa Download sequence
MGSPEIDKTT TPTTTTTTTT TTNTNTSPSD SVTIQDSAIF SYISNLSPIK PVKAAPMAAG 60 FSGLGSPPSV FTSPHLNRHQ ETSYLKRPRC RQLCSAELSQ QDVRGKKIAI CSNEIEKSET 120 QGSSVLVPCT EKECENKGSV QGQATSPSGC VDDYLADSVE VDCANSVHSG SLSLIQSGDV 180 PKSLNDCNDL KEMIPKLDEK NDIGQYAEKA LGAFPATSEL AGQNFQEKSS FDNKPVETDT 240 KQGSSEMTPN ICPIVESDLS VDKALEEHYD LPVAQHVVAA HKEKLDCAIQ FLQESLQPIQ 300 GYGDSSMTAI QASDRHVENI ILHDPKGKQH SGMHRRCPWF EEAHQNIMTN SPGFGSPSNI 360 VTNSRLSTSH ADLEVFESSC LEVSAASSGR QLINLTQPMI SHRNSGSKSA VLKPSGRKLI 420 CQQPANTKSG SILRNVREKV SASSEDGSYE TQALAAITSL ASQSSQIEKP SNDPALLKQG 480 EYQTTPCDKG KSISKRADAV EELNRSSPKK KRKKAWTTND DDDDDDDDDD YSCIHCNCKK 540 SKCLKLYCDC LAAGIYCDET CTCQECFNRL DYEDTVQETR QQIESRNPLA FAPKIVQHVT 600 DSPANNNGEN GNNSTPSSAR HKRGCNCKKS MCSKKYCECY QANVGCSTGC RCEGCKNVYG 660 RKEEYDMTKD ALSKGPIHES FENTFDEKLE MVSNQEGLLQ TELCNPQNLM PLTPSFQFSN 720 HWKDVSKSQF STRRSLPSPA SNVTFLPPHG KSQRSPENSD SHGMLLKARK HDEDVVSCYQ 780 GLDYSNAETV DGFSLRCDEL AIGNDLSTLT NPPSTTIASP LSSKLSDWTT ISRSQSCPVS 840 GHLSSIGSDE KLPDTMEDNM TEILKDTSTP LDALKVMSPP CIDSKDSTSQ NVNDPEDCSS 900 KK

Sequence ? help Back to Top

Protein Sequence Length: 902 aa Download sequence

MGSPEIDKTT TPTTTTTTTT TTNTNTSPSD SVTIQDSAIF SYISNLSPIK PVKAAPMAAG  60
FSGLGSPPSV FTSPHLNRHQ ETSYLKRPRC RQLCSAELSQ QDVRGKKIAI CSNEIEKSET  120
QGSSVLVPCT EKECENKGSV QGQATSPSGC VDDYLADSVE VDCANSVHSG SLSLIQSGDV  180
PKSLNDCNDL KEMIPKLDEK NDIGQYAEKA LGAFPATSEL AGQNFQEKSS FDNKPVETDT  240
KQGSSEMTPN ICPIVESDLS VDKALEEHYD LPVAQHVVAA HKEKLDCAIQ FLQESLQPIQ  300
GYGDSSMTAI QASDRHVENI ILHDPKGKQH SGMHRRCPWF EEAHQNIMTN SPGFGSPSNI  360
VTNSRLSTSH ADLEVFESSC LEVSAASSGR QLINLTQPMI SHRNSGSKSA VLKPSGRKLI  420
CQQPANTKSG SILRNVREKV SASSEDGSYE TQALAAITSL ASQSSQIEKP SNDPALLKQG  480
EYQTTPCDKG KSISKRADAV EELNRSSPKK KRKKAWTTND DDDDDDDDDD YSCIHCNCKK  540
SKCLKLYCDC LAAGIYCDET CTCQECFNRL DYEDTVQETR QQIESRNPLA FAPKIVQHVT  600
DSPANNNGEN GNNSTPSSAR HKRGCNCKKS MCSKKYCECY QANVGCSTGC RCEGCKNVYG  660
RKEEYDMTKD ALSKGPIHES FENTFDEKLE MVSNQEGLLQ TELCNPQNLM PLTPSFQFSN  720
HWKDVSKSQF STRRSLPSPA SNVTFLPPHG KSQRSPENSD SHGMLLKARK HDEDVVSCYQ  780
GLDYSNAETV DGFSLRCDEL AIGNDLSTLT NPPSTTIASP LSSKLSDWTT ISRSQSCPVS  840
GHLSSIGSDE KLPDTMEDNM TEILKDTSTP LDALKVMSPP CIDSKDSTSQ NVNDPEDCSS  900
KK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	509	542	KKKRKKAWTTNDDDDDDDDDDDYSCIHCNCKKSK
2	510	543	KKKRKKAWTTNDDDDDDDDDDDYSCIHCNCKKSK
3	510	514	KKRKK
4	511	542	KRKKAWTTNDDDDDDDDDDDYSCIHCNCKKSK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G14770.1	6e-56	CPP family protein