PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028053667.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | SBP | ||||||||
Protein Properties | Length: 209aa MW: 23251.7 Da PI: 9.5036 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 131.7 | 2.6e-41 | 82 | 159 | 1 | 78 |
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cq+e+Ceadl+eak+y+rrhkvCe h+ka++++v+gl+qrfCqqCsrfhelsefD++krsCrrrLa+hnerrrk+++ XP_028053667.1 82 RCQAEKCEADLTEAKRYYRRHKVCELHAKATAAIVAGLRQRFCQQCSRFHELSEFDDTKRSCRRRLAGHNERRRKSSS 159 6**************************************************************************976 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 209 aa Download sequence |
MDSRRPNPSS LSKQKSDDFA PDDDDDSVEE EDENYASEFG ISSEKGGLKK KNKKKKVKVG 60 FDGGSGKKRG GGGGGLLSSP PRCQAEKCEA DLTEAKRYYR RHKVCELHAK ATAAIVAGLR 120 QRFCQQCSRF HELSEFDDTK RSCRRRLAGH NERRRKSSSE SPHGGGEGCS SQRLGSELNE 180 NHCSRQADDR GRTLIAFPGN PTYKQFHIK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G15270.1 | 8e-40 | SBP family protein |