PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028053458.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | ERF | ||||||||
Protein Properties | Length: 241aa MW: 27049.4 Da PI: 8.3486 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 66.3 | 6e-21 | 49 | 98 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+W+AeIrdp+ + +r++lg+f+tae+Aa a+++a+++++g XP_028053458.1 49 HYRGVRQRP-WGKWAAEIRDPK----KaARVWLGTFDTAEDAALAYDEAALRFKG 98 7********.**********94....45***********************9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 241 aa Download sequence |
MTRRLKIKAA KPGTYPKACH EILTCHACML AMLNPWLNDF CEGNIRRRHY RGVRQRPWGK 60 WAAEIRDPKK AARVWLGTFD TAEDAALAYD EAALRFKGTK AKLNFPERVQ AKTGYGFFMS 120 HGDSTAFHES IPNPAPHHHH HHPLPLPVMS MSSQEAYPDL DQYAQLLSSN DADFPYFTSA 180 LYNQQQQHFV SQSSTMTSTA PLMPSITSES DEFLSFSSQF QSSSSADLLN HGKHFGTGSG 240 T |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G13330.1 | 9e-35 | ERF family protein |