PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028053411.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 294aa MW: 33163.8 Da PI: 4.8711

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028053411.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	31.3	6.6e-10	112	161	47	90
FAR1 47 k..tekerrtraetrtgCkaklkvkkek....dgkwevtkleleHnHela 90 + +ek+r ++a tr+gCka+++++ + gk++vt+++ +HnHela XP_028053411.1 112 DrvAEKSRAPKALTRVGCKAQFRIRYNAdageGGKYVVTHFVADHNHELA 161 244689999**************998777789************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 294 aa Download sequence
MAPAEVKREG DDYDIPNEAD DIRLMNESRA EPYHGCEAGP SNEEATNMNV EDGGADVKKE 60 MVDDAHRNDM VGDVERAILE QKFDSIEDGE AFYNAYAKPR DLEGQRLPKY LDRVAEKSRA 120 PKALTRVGCK AQFRIRYNAD AGEGGKYVVT HFVADHNHEL AEQHCVMYLR SHRTLNSANK 180 AQVMAMRNVG VKTSQIMDYM VNQSESYENV GFICTDLHNH IQAECRAEVE DGDAQDSKSR 240 ADYAKFGDVL IFDSTYRTNA YKKPFVMLTG VTSHFRTTIF ACVLLVNETS ETYT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-28	FAR1 family protein