PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028053226.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

HSF

Protein Properties

Length: 400aa MW: 46072 Da PI: 4.5585

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028053226.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	112	4e-35	41	132	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl+k++e++ed++ ++++sws+ nsfvv+d+++f++++Lp+yFkh+nf+SF+RQLn+YgFkkv+ ++ weF+++ F g+k+ll++ XP_028053226.1 41 FLSKTFEMVEDPSSDSVVSWSRARNSFVVWDSHKFSTTLLPRYFKHNNFSSFIRQLNTYGFKKVDPDR---------WEFANEGFLGGQKHLLKT 126 9**************************************************************999.........************** PP XXXXXX CS HSF_DNA-bind 97 ikrkks 102 ikr+++ XP_028053226.1 127 IKRRRN 132 *986 PP

Sequence ? help Back to Top
Protein Sequence Length: 400 aa Download sequence
MEVVIVKEEE TTVISSSSSS LSSSSSPRPM EGLHDVGPPP FLSKTFEMVE DPSSDSVVSW 60 SRARNSFVVW DSHKFSTTLL PRYFKHNNFS SFIRQLNTYG FKKVDPDRWE FANEGFLGGQ 120 KHLLKTIKRR RNVAQNMQQE VGACVELGQY GMEEELERLR RDRNMLMAEI VKLRQQQQNA 180 RDKVSGMEER IRNTERKQHQ MMSFLAKALS SPSFVQQYVD KYLQKRKQRG VEIGRKRRLT 240 MSPSVENLEE VASFTVEIGQ EQEDLVNIES DMETLFSAAL DNESSSDIDP KPESILTSSG 300 TNLDNVSETM WEEFFTEGVI GGNEEGEVLV GNQLEVDVEV EDLATTSADW AEDLQELVDQ 360 MGFLREWWKL QGGQEMILFF CILQLFPVIK LVFFFFFFFF

Sequence ? help Back to Top

Protein Sequence Length: 400 aa Download sequence

MEVVIVKEEE TTVISSSSSS LSSSSSPRPM EGLHDVGPPP FLSKTFEMVE DPSSDSVVSW  60
SRARNSFVVW DSHKFSTTLL PRYFKHNNFS SFIRQLNTYG FKKVDPDRWE FANEGFLGGQ  120
KHLLKTIKRR RNVAQNMQQE VGACVELGQY GMEEELERLR RDRNMLMAEI VKLRQQQQNA  180
RDKVSGMEER IRNTERKQHQ MMSFLAKALS SPSFVQQYVD KYLQKRKQRG VEIGRKRRLT  240
MSPSVENLEE VASFTVEIGQ EQEDLVNIES DMETLFSAAL DNESSSDIDP KPESILTSSG  300
TNLDNVSETM WEEFFTEGVI GGNEEGEVLV GNQLEVDVEV EDLATTSADW AEDLQELVDQ  360
MGFLREWWKL QGGQEMILFF CILQLFPVIK LVFFFFFFFF

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	124	130	LKTIKRR
2	158	163	RLRRDR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G26150.1	1e-116	HSF family protein