PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028052911.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family B3
Protein Properties Length: 291aa    MW: 33185.9 Da    PI: 8.4806
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028052911.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B354.42.3e-1734117898
                     -HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
              B3   8 sdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                     s     + l++pkkfa+++g++   +  +tl+ ++gr W + +  +k +++ ++ +GWkeF++ + +  g f++Fk++++s+f  +v++f+
  XP_028052911.1  34 SI-IHDNKLRIPKKFAAKYGNE--LTSIVTLTVPNGRIWHLGV--EKADNMLWFHNGWKEFAEHHSISCGFFILFKYEENSKF--NVHIFD 117
                     33.44566***********865..5669***************..********************************999999..999997 PP
2B362.76.1e-20189284199
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                     f  +l + +v++++ l++p +fa++h +     k + l+ + g++W+v + ++  ++   ltkGW+ F ++n+L egD++vF+l++ ++  l+v+
  XP_028052911.1 189 FTAILRQYNVHRRCVLYVPANFARNHLNA--ALKFIELQVSGGKRWKVSC-FCVDGRVLNLTKGWSTFMRENHLVEGDVCVFELIQAKDDVLKVS 280
                     4556677789999**********999433..34579999***********.8999999***************************999999**** PP

                     EE-S CS
              B3  96 vfrk 99 
                     +fr+
  XP_028052911.1 281 IFRT 284
                     **97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 291 aa     Download sequence    
MGGEGSDSQR PNIPVRGTLS SSSSSSFYKI ILPSIIHDNK LRIPKKFAAK YGNELTSIVT  60
LTVPNGRIWH LGVEKADNML WFHNGWKEFA EHHSISCGFF ILFKYEENSK FNVHIFDLTA  120
CEIHYPRNTI SISEEPSHGK QYPAKDEEEV EFLGVNTCSN SVTRQPVTTQ EREKAVNAAM  180
MFKPKNPFFT AILRQYNVHR RCVLYVPANF ARNHLNAALK FIELQVSGGK RWKVSCFCVD  240
GRVLNLTKGW STFMRENHLV EGDVCVFELI QAKDDVLKVS IFRTQGSEET F
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49480.14e-34B3 family protein