PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028052825.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | ERF | ||||||||
Protein Properties | Length: 245aa MW: 27100.7 Da PI: 4.7713 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 50.3 | 6.1e-16 | 72 | 123 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56 +y GVr ++ +g+++ eIrd + + r++lg+f taeeAa a+++a+ ++ge XP_028052825.1 72 RYIGVRKRP-WGKYAGEIRDSTR---QgVRVWLGTFSTAEEAALAYDQAAFVMRGE 123 799******.**********322...24************************9997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 245 aa Download sequence |
MENSQYIRFD IMPESPFAEI NFRNDSLPSE ASVLLAYENV KEKSLETDSC KGFNDEEGFT 60 SKAKKEAGKE KRYIGVRKRP WGKYAGEIRD STRQGVRVWL GTFSTAEEAA LAYDQAAFVM 120 RGELARLNFP SEESLRDVKT IKSSSCSCSC SCENGGSSSS SSSSSSSNSP TAAAAANMLV 180 FEFEDLGADL LAHLKDLLME LDSIIHLPSL LCTSISFMPL ILTYILLITY YNITIYIYCI 240 CSSHV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G06160.1 | 9e-22 | ERF family protein |