PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_028052824.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 181aa MW: 20015.2 Da PI: 4.727 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 56.5 | 7e-18 | 65 | 115 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 +y GVr ++ +g+++AeIrd + + r++lg+f taeeAa a+++a+ ++g XP_028052824.1 65 RYIGVRKRP-WGKYAAEIRDSTR---QgVRVWLGTFTTAEEAALAYDQAAFVMRG 115 799******.**********322...24***********************9998 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 181 aa Download sequence |
MEDCSSSQYL RFDIMPESPF AEINFRKQAD ENVKEKSLET DSCKVFNDDE GFTSKAKKEA 60 GKEKRYIGVR KRPWGKYAAE IRDSTRQGVR VWLGTFTTAE EAALAYDQAA FVMRGPSARL 120 TADRVQESLR DMKTMKSSSS SCENGGSSSS NSPAAATAAN MLVFEFEDLG ADLLDELLSS 180 S |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G23240.1 | 7e-23 | ERF family protein |