PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028052823.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | ERF | ||||||||
Protein Properties | Length: 186aa MW: 20467.7 Da PI: 4.6427 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 55.9 | 1e-17 | 72 | 122 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 +y GVr ++ +g+++AeIrd + + r++lg+f taeeAa a+++a+ ++g XP_028052823.1 72 RYIGVRKRP-WGKYAAEIRDSTR---QgVRVWLGTFTTAEEAALAYDQAAFVMRG 122 699******.**********322...24***********************9998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 186 aa Download sequence |
MEDSQYLRFG IMPESPFAEI NFRNDSLPSE ANVLLADESV KEKSLETDSC KGFNDEEGFT 60 SKAKKEAGKE RRYIGVRKRP WGKYAAEIRD STRQGVRVWL GTFTTAEEAA LAYDQAAFVM 120 RGPSARLNRV QESLRDMKTM KSSSSSCEIG GSSSSSSSNS AAAANMLVFE FEDLGADLLD 180 ELLSSS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G23240.1 | 7e-22 | ERF family protein |