PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028052821.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | ERF | ||||||||
Protein Properties | Length: 233aa MW: 26175.1 Da PI: 6.3029 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 54.1 | 4e-17 | 82 | 132 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 +y GVr ++ +g+++AeIrd + + +r++lg+f taeeAa a+++a+ ++g XP_028052821.1 82 RYIGVRNRP-WGKYAAEIRDSTR---QgARVWLGTFTTAEEAALAYDQAAFVMRG 132 799***777.**********322...24***********************9998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 233 aa Download sequence |
MEDCSSPQYL GFDFLPQSPF SSWYEPEELF HTKSLSCEEN PLDENFPEKV KEKSLETDSC 60 KGFNDKEDFT SKAKKAAGKE KRYIGVRNRP WGKYAAEIRD STRQGARVWL GTFTTAEEAA 120 LAYDQAAFVM RGPLARLNFP TERVRESLHQ NGGESSSSSS NCTCTSSSSP AAALKERNKM 180 RMKLLTSRRR RNNEKEGIVV KPGANMSIFE FEDLGAELLD ELLSSSERAS HST |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G23240.1 | 7e-26 | ERF family protein |