PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028052601.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | ERF | ||||||||
Protein Properties | Length: 199aa MW: 21812.5 Da PI: 10.1295 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 62.5 | 9.2e-20 | 22 | 71 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 +++GVr ++ +gr++AeIrdp r r++lg+f+taeeAa a++aa+++++g XP_028052601.1 22 HFRGVRKRP-WGRYAAEIRDP---A-RkSRVWLGTFDTAEEAAMAYDAAAREFRG 71 58*******.**********8...2.35*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 199 aa Download sequence |
MAPKERAADG GAKVKLNGKE MHFRGVRKRP WGRYAAEIRD PARKSRVWLG TFDTAEEAAM 60 AYDAAAREFR GPKAKTNFSP PPPPPPHENV KNTSNQSPSQ SSTVDSSSLM LDSSSPSLDL 120 SLSHGGVLPP VNRIFYFDSI LSSCSRDVQN QRRRYDHVTV AAAKADFRAS HGVRVQSDCV 180 KPHIAIGFDL NFPPPPETA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G44210.1 | 2e-23 | ERF family protein |