PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028052192.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 243aa MW: 28005.9 Da PI: 9.0339 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 100.6 | 6.1e-32 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krienk+nrqvtf+kRrng++KKA+ELSvLCdaeva+i+fs++gklye++s XP_028052192.1 9 KRIENKINRQVTFAKRRNGLFKKAYELSVLCDAEVALIVFSNRGKLYEFCS 59 79***********************************************96 PP | |||||||
2 | K-box | 100.3 | 2.8e-33 | 84 | 173 | 11 | 100 |
K-box 11 eakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 + ++++ ++e+ +Lk+++e Lq++qR+llGedL++L+ keL qLe qLe+slkkiRs+K++++l+q+ +lq++e++l e nkaLr+klee XP_028052192.1 84 AIENQNNYHEYLRLKARVEILQQSQRNLLGEDLGPLNTKELDQLEYQLENSLKKIRSTKTQFMLDQLADLQRREQMLAESNKALRRKLEE 173 557899*********************************************************************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 243 aa Download sequence |
MGRGRVDLKR IENKINRQVT FAKRRNGLFK KAYELSVLCD AEVALIVFSN RGKLYEFCSG 60 SSMAKTLERY QRCSYDLLDP RQPAIENQNN YHEYLRLKAR VEILQQSQRN LLGEDLGPLN 120 TKELDQLEYQ LENSLKKIRS TKTQFMLDQL ADLQRREQML AESNKALRRK LEETTAENPL 180 QLSWEAGGQT MHYNRFPAQS EGFFQPLGLN STLQMGYNPM GTDEMNAAAP TQIANGFIPG 240 WML |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G15800.1 | 1e-103 | MIKC_MADS family protein |