PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028052192.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family MIKC_MADS
Protein Properties Length: 243aa    MW: 28005.9 Da    PI: 9.0339
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028052192.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF100.66.1e-32959151
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    krienk+nrqvtf+kRrng++KKA+ELSvLCdaeva+i+fs++gklye++s
  XP_028052192.1  9 KRIENKINRQVTFAKRRNGLFKKAYELSVLCDAEVALIVFSNRGKLYEFCS 59
                    79***********************************************96 PP

2K-box100.32.8e-338417311100
           K-box  11 eakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100
                     + ++++ ++e+ +Lk+++e Lq++qR+llGedL++L+ keL qLe qLe+slkkiRs+K++++l+q+ +lq++e++l e nkaLr+klee
  XP_028052192.1  84 AIENQNNYHEYLRLKARVEILQQSQRNLLGEDLGPLNTKELDQLEYQLENSLKKIRSTKTQFMLDQLADLQRREQMLAESNKALRRKLEE 173
                     557899*********************************************************************************987 PP

Sequence ? help Back to Top
Protein Sequence    Length: 243 aa     Download sequence    
MGRGRVDLKR IENKINRQVT FAKRRNGLFK KAYELSVLCD AEVALIVFSN RGKLYEFCSG  60
SSMAKTLERY QRCSYDLLDP RQPAIENQNN YHEYLRLKAR VEILQQSQRN LLGEDLGPLN  120
TKELDQLEYQ LENSLKKIRS TKTQFMLDQL ADLQRREQML AESNKALRRK LEETTAENPL  180
QLSWEAGGQT MHYNRFPAQS EGFFQPLGLN STLQMGYNPM GTDEMNAAAP TQIANGFIPG  240
WML
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G15800.11e-103MIKC_MADS family protein