PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028051848.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

WRKY

Protein Properties

Length: 435aa MW: 48092.6 Da PI: 6.2853

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028051848.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	96.3	2.1e-30	162	219	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 +DgynWrKYGqK vkg+ef rsYYrCt+++C++k++vers+ d+++++++Y g+H+h+k XP_028051848.1 162 EDGYNWRKYGQKLVKGNEFIRSYYRCTHSKCTAKRQVERSQ-DGQITDTVYLGKHEHPK 219 7**************************************.*************85 PP
2	WRKY	104.9	4.4e-33	336	394	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ++Dgy+WrKYGqK vkg+++prsYYrC+ agCpvkk+ver+++dpkvv++tY g+H+h+ XP_028051848.1 336 VNDGYRWRKYGQKLVKGNPNPRSYYRCSNAGCPVKKHVERASHDPKVVITTYGGQHDHD 394 58********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 435 aa Download sequence
MVTFGEAVQD ELASDKSQQR KSPESGYQES QFNQEGSTVS VLPEKESSEL QKTESSNAEF 60 SASQCKEEGN TLSTITDKVL EHVKQRQSSL RVSPNLQGRQ NPDSASGDQT SEGNQEGSSH 120 SVIPEKVSDN LQQRQRSETV VHASQSNQEG RTPSKIPDKV SEDGYNWRKY GQKLVKGNEF 180 IRSYYRCTHS KCTAKRQVER SQDGQITDTV YLGKHEHPKP QPSPQIAVSF VPPIQAKRQD 240 EPSLSIGEDK SSDAHVLTSH CAEPMETPPL PTTAPTDDAA EGASLQSNRM RDEVDHSGVP 300 DTKKQKRDIG NIDEILVEKP NGESRVVQTT SEIDIVNDGY RWRKYGQKLV KGNPNPRSYY 360 RCSNAGCPVK KHVERASHDP KVVITTYGGQ HDHDMPPTRT VTLNTAGSDT NTTAPNGELR 420 SKPEETSEVV HTSAN

Sequence ? help Back to Top

Protein Sequence Length: 435 aa Download sequence

MVTFGEAVQD ELASDKSQQR KSPESGYQES QFNQEGSTVS VLPEKESSEL QKTESSNAEF  60
SASQCKEEGN TLSTITDKVL EHVKQRQSSL RVSPNLQGRQ NPDSASGDQT SEGNQEGSSH  120
SVIPEKVSDN LQQRQRSETV VHASQSNQEG RTPSKIPDKV SEDGYNWRKY GQKLVKGNEF  180
IRSYYRCTHS KCTAKRQVER SQDGQITDTV YLGKHEHPKP QPSPQIAVSF VPPIQAKRQD  240
EPSLSIGEDK SSDAHVLTSH CAEPMETPPL PTTAPTDDAA EGASLQSNRM RDEVDHSGVP  300
DTKKQKRDIG NIDEILVEKP NGESRVVQTT SEIDIVNDGY RWRKYGQKLV KGNPNPRSYY  360
RCSNAGCPVK KHVERASHDP KVVITTYGGQ HDHDMPPTRT VTLNTAGSDT NTTAPNGELR  420
SKPEETSEVV HTSAN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G04880.2	4e-79	WRKY family protein