PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028051846.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

WRKY

Protein Properties

Length: 468aa MW: 51752.8 Da PI: 6.4626

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028051846.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	96.1	2.3e-30	195	252	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 +DgynWrKYGqK vkg+ef rsYYrCt+++C++k++vers+ d+++++++Y g+H+h+k XP_028051846.1 195 EDGYNWRKYGQKLVKGNEFIRSYYRCTHSKCTAKRQVERSQ-DGQITDTVYLGKHEHPK 252 7**************************************.*************85 PP
2	WRKY	104.7	4.9e-33	369	427	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ++Dgy+WrKYGqK vkg+++prsYYrC+ agCpvkk+ver+++dpkvv++tY g+H+h+ XP_028051846.1 369 VNDGYRWRKYGQKLVKGNPNPRSYYRCSNAGCPVKKHVERASHDPKVVITTYGGQHDHD 427 58********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 468 aa Download sequence
MVTFGEAVQD ELASDKSQQR KSPESGYQES QFNQEGSTVS VLPEKESSEL QKTESSNAEF 60 SASQCKEEGN TLSTITDKVL EHVKQRQSSL RVSPNLQGRQ NPDSASGDQT SEGNQEGSSH 120 SVIPEKVSDN LQQRQRSETV VHASQSNQEG SILSVKPEKL PTSLQLTQNL KTGSHMLQRD 180 QEGRTPSKIP DKVSEDGYNW RKYGQKLVKG NEFIRSYYRC THSKCTAKRQ VERSQDGQIT 240 DTVYLGKHEH PKPQPSPQIA VSFVPPIQAK RQDEPSLSIG EDKSSDAHVL TSHCAEPMET 300 PPLPTTAPTD DAAEGASLQS NRMRDEVDHS GVPDTKKQKR DIGNIDEILV EKPNGESRVV 360 QTTSEIDIVN DGYRWRKYGQ KLVKGNPNPR SYYRCSNAGC PVKKHVERAS HDPKVVITTY 420 GGQHDHDMPP TRTVTLNTAG SDTNTTAPNG ELRSKPEETS EVVHTSAN

Sequence ? help Back to Top

Protein Sequence Length: 468 aa Download sequence

MVTFGEAVQD ELASDKSQQR KSPESGYQES QFNQEGSTVS VLPEKESSEL QKTESSNAEF  60
SASQCKEEGN TLSTITDKVL EHVKQRQSSL RVSPNLQGRQ NPDSASGDQT SEGNQEGSSH  120
SVIPEKVSDN LQQRQRSETV VHASQSNQEG SILSVKPEKL PTSLQLTQNL KTGSHMLQRD  180
QEGRTPSKIP DKVSEDGYNW RKYGQKLVKG NEFIRSYYRC THSKCTAKRQ VERSQDGQIT  240
DTVYLGKHEH PKPQPSPQIA VSFVPPIQAK RQDEPSLSIG EDKSSDAHVL TSHCAEPMET  300
PPLPTTAPTD DAAEGASLQS NRMRDEVDHS GVPDTKKQKR DIGNIDEILV EKPNGESRVV  360
QTTSEIDIVN DGYRWRKYGQ KLVKGNPNPR SYYRCSNAGC PVKKHVERAS HDPKVVITTY  420
GGQHDHDMPP TRTVTLNTAG SDTNTTAPNG ELRSKPEETS EVVHTSAN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G04880.2	2e-79	WRKY family protein