PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028051844.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | GRAS | ||||||||
Protein Properties | Length: 518aa MW: 58218.1 Da PI: 5.8458 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 455.3 | 3.9e-139 | 148 | 518 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 l+++L++cA+ vs++dl +aq+l+a+l++l+s +g+p+qRl ay++e+L arl++s+s +y++l+++e + s++ l+++++++ev+P++kf++ XP_028051844.1 148 LKQVLIACAKSVSESDLLNAQRLMAELRQLVSVSGEPIQRLGAYMLEGLVARLSSSGSLIYQTLRCKEPA---SADLLSYMHILYEVCPYFKFGY 239 5799*****************************************************************9...9********************* PP GRAS 96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrled 188 + aN aI ea++ e+rvHiiDf+i+qG QW++L+qa+a+Rp+gpp++ iTg+++++s + l+ +g+rL+++Ae+++vpfef+ +a + + XP_028051844.1 240 MSANGAIAEAMKDENRVHIIDFQIGQGSQWVTLIQAFAARPGGPPHICITGIDDSTSAyaRGGGLNIVGQRLSRLAESFKVPFEFHG-AAMSGCE 333 ******************************************************998899999************************.89999** PP GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283 ++le+L +++gEalaVn++++lh+++desvs++++rd++L+lvkslsPkvv++veqe+++n++ F+ rfleal+yy+a+f+s++++lpr+++eri XP_028051844.1 334 VQLENLGIRHGEALAVNFAFMLHHMPDESVSTQNHRDRLLRLVKSLSPKVVTLVEQESNTNTAAFVPRFLEALDYYTAMFESIDVTLPRKHKERI 428 *********************************************************************************************** PP GRAS 284 kvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374 +vE+++l+r++vnvvaceg er+erhe l+kW++r+++aGF+p+pls+ +++++k+ll+++ + yr+ee++g+l+lgW++r Lv+ +aW+ XP_028051844.1 429 NVEQHCLARDVVNVVACEGIERVERHELLGKWKSRFTMAGFTPYPLSSLVNATIKTLLENYCD-KYRLEERDGALYLGWMNRDLVASCAWK 518 *************************************************************95.5*************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 518 aa Download sequence |
MSNTLYYQPK LEVEDYCYPQ FQTFDQQSRY SNSSHGSHFS IHTSGEKYCT LDSFPATGCY 60 AVYNSPSTLS FSPNGSPISQ QECHSYGSCV TDDFIEFRHK LRELETVMLG PDSDILDSYD 120 STILQEGVAS PEIDSWRQMM EAIPRRDLKQ VLIACAKSVS ESDLLNAQRL MAELRQLVSV 180 SGEPIQRLGA YMLEGLVARL SSSGSLIYQT LRCKEPASAD LLSYMHILYE VCPYFKFGYM 240 SANGAIAEAM KDENRVHIID FQIGQGSQWV TLIQAFAARP GGPPHICITG IDDSTSAYAR 300 GGGLNIVGQR LSRLAESFKV PFEFHGAAMS GCEVQLENLG IRHGEALAVN FAFMLHHMPD 360 ESVSTQNHRD RLLRLVKSLS PKVVTLVEQE SNTNTAAFVP RFLEALDYYT AMFESIDVTL 420 PRKHKERINV EQHCLARDVV NVVACEGIER VERHELLGKW KSRFTMAGFT PYPLSSLVNA 480 TIKTLLENYC DKYRLEERDG ALYLGWMNRD LVASCAWK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G48150.1 | 0.0 | GRAS family protein |