PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028051760.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

WRKY

Protein Properties

Length: 541aa MW: 58403.5 Da PI: 7.3916

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028051760.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	96.4	1.9e-30	211	270	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dg++WrKYGqK kg+++pr+YYrCt a +Cpv+k+v+r+aed +++++tYeg+Hnh+ XP_028051760.1 211 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVApSCPVRKQVQRCAEDMSILITTYEGTHNHP 270 58*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 541 aa Download sequence
MEVSLRTSDD GVVVVKEDNR VESNGCCDKE IIHTDNQLES AKAEMGEARE ENRRLRMHLN 60 QIMKDYQTLQ MQFHDIVGRG ATKESTNTTR TSHQETEEPE FVSLSLGRTS SDSRKDIEKP 120 SKGKEDLEDK QGLALGLDCK FEVPKTTPIE TSLKLSPENS SNEVKDEAGE TWPPPKGVKT 180 MRSGDDEEVL LGNSVKKARV SVRIRCDTPT MNDGCQWRKY GQKIAKGNPC PRAYYRCTVA 240 PSCPVRKQVQ RCAEDMSILI TTYEGTHNHP LAISATAMAS TTSAAASMLS SGSSSTTGSP 300 STAITASTTS ALRGLNFYLS DNPKSNQFVF PYSSISSSPS YPTITLDLTS SSSSSHFSKI 360 SSSFLSTPRY SSTNLNFNSW NNNTGVLNYG TQSQLYNKNN QFGSLSFSRQ QTQEIFNQSF 420 MQKSNPNPSY PINPNPSQQQ PLPADSIAAA TKAITSDPNF QSALAAALTS IIGGSGNGSG 480 NDSGGAKTLG SQGQNLNLGE SFPGVSNFPS IVPSATNKCY STPSLLFSTS KSKSTSPSNG 540 D

Sequence ? help Back to Top

Protein Sequence Length: 541 aa Download sequence

MEVSLRTSDD GVVVVKEDNR VESNGCCDKE IIHTDNQLES AKAEMGEARE ENRRLRMHLN  60
QIMKDYQTLQ MQFHDIVGRG ATKESTNTTR TSHQETEEPE FVSLSLGRTS SDSRKDIEKP  120
SKGKEDLEDK QGLALGLDCK FEVPKTTPIE TSLKLSPENS SNEVKDEAGE TWPPPKGVKT  180
MRSGDDEEVL LGNSVKKARV SVRIRCDTPT MNDGCQWRKY GQKIAKGNPC PRAYYRCTVA  240
PSCPVRKQVQ RCAEDMSILI TTYEGTHNHP LAISATAMAS TTSAAASMLS SGSSSTTGSP  300
STAITASTTS ALRGLNFYLS DNPKSNQFVF PYSSISSSPS YPTITLDLTS SSSSSHFSKI  360
SSSFLSTPRY SSTNLNFNSW NNNTGVLNYG TQSQLYNKNN QFGSLSFSRQ QTQEIFNQSF  420
MQKSNPNPSY PINPNPSQQQ PLPADSIAAA TKAITSDPNF QSALAAALTS IIGGSGNGSG  480
NDSGGAKTLG SQGQNLNLGE SFPGVSNFPS IVPSATNKCY STPSLLFSTS KSKSTSPSNG  540
D

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15130.1	2e-60	WRKY family protein