PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028051661.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | E2F/DP | ||||||||
Protein Properties | Length: 381aa MW: 42872.3 Da PI: 9.4008 | ||||||||
Description | E2F/DP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | E2F_TDP | 64.7 | 1.3e-20 | 20 | 92 | 1 | 71 |
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealn.......liekkekneirwkg 71 rk+ksL+ll+++fl+l+++ + +++ l+++a++L v +rRRiYDi+NVLe+++ ++++k+kn+++wkg XP_028051661.1 20 RKQKSLGLLCTNFLSLYNQDNVETIGLDDAATRL---GV--ERRRIYDIVNVLESIGgfdnfiqVLARKAKNRYSWKG 92 79*****************999************...**..**************8622222226666********98 PP | |||||||
2 | E2F_TDP | 74.7 | 9.7e-24 | 142 | 226 | 1 | 71 |
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvse.........dvknkrRRiYDilNVLealnliek.....kekneirwkg 71 rkeksL+lltq+f+kl+ +s+ + ++l+e+ak L+ + + k+RR+YDi+NVL+++n iek ++k+++rw g XP_028051661.1 142 RKEKSLGLLTQNFVKLFLCSNVDLISLEEAAKILLGDahdpsmmrnNSAAKVRRLYDIANVLSSMNFIEKthhpeTRKPAFRWLG 226 79******************************************9977789********************99999*******87 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 381 aa Download sequence |
MALPPSASNE SGSANFPYCR KQKSLGLLCT NFLSLYNQDN VETIGLDDAA TRLGVERRRI 60 YDIVNVLESI GGFDNFIQVL ARKAKNRYSW KGFGGVPKTL QQLRVSDDDE DEKISNPITS 120 QNDKLNPSSV TKSSTASKTD NRKEKSLGLL TQNFVKLFLC SNVDLISLEE AAKILLGDAH 180 DPSMMRNNSA AKVRRLYDIA NVLSSMNFIE KTHHPETRKP AFRWLGTRGK SDNGSANTSV 240 LNESKKRIFG TEITNTSFKR TKVVSTIDEN SKQITKTHLQ MLVKCEDLEN EVDKSNFEQD 300 LRHSSKNFQF GPFAPVTVHV SKFGATQNST VKQVHDWESL ASTYRPQYYN QALRDLFAHY 360 VEAWKSWCSE VAGKNPIQLI S |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G48160.2 | 1e-112 | E2F/DP family protein |