PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028051660.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

E2F/DP

Protein Properties

Length: 388aa MW: 43821.3 Da PI: 9.3726

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028051660.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	76.2	3.2e-24	20	85	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 rk+ksL+ll+++fl+l+++ + +++ l+++a++L v +rRRiYDi+NVLe+++++++k+kn+++wkg XP_028051660.1 20 RKQKSLGLLCTNFLSLYNQDNVETIGLDDAATRL---GV--ERRRIYDIVNVLESIGVLARKAKNRYSWKG 85 79***************999********.....****************************98 PP
2	E2F_TDP	78.6	5.6e-25	153	233	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvse.....dvknkrRRiYDilNVLealnliek.....kekneirwkg 71 rkeksL+lltq+f+kl+ +s+ + ++l+e+ak L+ + +++k+RR+YDi+NVL+++n iek ++k+++rw g XP_028051660.1 153 RKEKSLGLLTQNFVKLFLCSNVDLISLEEAAKILLGDahdpsMMRTKVRRLYDIANVLSSMNFIEKthhpeTRKPAFRWLG 233 79*************************************999*******************99999*****87 PP

Sequence ? help Back to Top
Protein Sequence Length: 388 aa Download sequence
MALPPSASNE SGSANFPYCR KQKSLGLLCT NFLSLYNQDN VETIGLDDAA TRLGVERRRI 60 YDIVNVLESI GVLARKAKNR YSWKGFGGVP KTLQQLREEG LRENFNTFNG NNYVKVSDDD 120 EDEKISNPIT SQNDKLNPSS VTKSSTASKT DNRKEKSLGL LTQNFVKLFL CSNVDLISLE 180 EAAKILLGDA HDPSMMRTKV RRLYDIANVL SSMNFIEKTH HPETRKPAFR WLGTRGKSDN 240 GSANTSVLNE SKKRIFGTEI TNTSFKRTKV VSTIDENSKQ ITKTHLQMLV KCEDLENEVD 300 KSNFEQDLRH SSKNFQFGPF APVTVHVSKF GATQNSTVKQ VHDWESLAST YRPQYYNQAL 360 RDLFAHYVEA WKSWCSEVAG KNPIQLIS

Sequence ? help Back to Top

Protein Sequence Length: 388 aa Download sequence

MALPPSASNE SGSANFPYCR KQKSLGLLCT NFLSLYNQDN VETIGLDDAA TRLGVERRRI  60
YDIVNVLESI GVLARKAKNR YSWKGFGGVP KTLQQLREEG LRENFNTFNG NNYVKVSDDD  120
EDEKISNPIT SQNDKLNPSS VTKSSTASKT DNRKEKSLGL LTQNFVKLFL CSNVDLISLE  180
EAAKILLGDA HDPSMMRTKV RRLYDIANVL SSMNFIEKTH HPETRKPAFR WLGTRGKSDN  240
GSANTSVLNE SKKRIFGTEI TNTSFKRTKV VSTIDENSKQ ITKTHLQMLV KCEDLENEVD  300
KSNFEQDLRH SSKNFQFGPF APVTVHVSKF GATQNSTVKQ VHDWESLAST YRPQYYNQAL  360
RDLFAHYVEA WKSWCSEVAG KNPIQLIS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G48160.2	1e-126	E2F/DP family protein