PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028051469.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 397aa    MW: 47172.9 Da    PI: 8.808
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028051469.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR134.47.4e-113682147
            FAR1  1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk 47
                    +fYn+Y  +vGFs+rk++ +k+k +++ ++r +vC+k+g+++ ++++
  XP_028051469.1 36 DFYNTYRGRVGFSIRKDYCSKNKFTNQLICRILVCNKKGFQKLDNEE 82
                    6****************************************998776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 397 aa     Download sequence    
MLFILLHFDM DMELENDYAW KPKEGMTFDS EQCAYDFYNT YRGRVGFSIR KDYCSKNKFT  60
NQLICRILVC NKKGFQKLDN EEQITIRFWV DAQMIMYYAP FGDVVTFDTT YKLNKEYRLF  120
ASFVGFNHYR ETVIFDAALL YDETAKLSVC LFQTFLEAMS RKAPKNLFID QDVAMAKAIP  180
IVMPDTSHRL CTWHLMQNAL KHVNCLLQDK VVKSVLNKFM FDIEDENEWK LEWVEKLDKY  240
DAHDNHWLKL TFTILYENRY KELEVGYALC QRLPKVKATR RMLIQMGNGY TKNIFEEFQN  300
EYFHSIELDI KVIEYGEACT IYTVVVVARK HAKKVKMKRD DSLGCNRTKF ERKGILCCHS  360
LKVIRDVLKM KEVPSQYILK RWTKQARAKI VRDINGK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.14e-37FAR1 family protein