PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028051280.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

AP2

Protein Properties

Length: 344aa MW: 38671.8 Da PI: 8.521

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028051280.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	48.1	2.9e-15	39	98	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng...kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d ++n k+ ++++lg ++ +e Aa a++ a++k++g XP_028051280.1 39 SIYRGVTRHRWTGRYEAHLWDkNCWNEsqkKKgRQVYLGAYDDEETAAHAYDMAALKYWG 98 57*****************999977776447***********************98 PP
2	AP2	51.3	2.9e-16	141	192	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV +++ +grW+A+I + g +k+ +lg++ t eeAa a++ a+ +++g XP_028051280.1 141 SKYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTYATQEEAATAYDMAAIEYRG 192 89**99******99966...3.6***********************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 344 aa Download sequence
MAKISQKNTS NTSSNSKPAT KAKRTRKSVP RESPPQRSSI YRGVTRHRWT GRYEAHLWDK 60 NCWNESQKKK GRQVYLGAYD DEETAAHAYD MAALKYWGQD TILNFPLSTY QEELKGMESQ 120 SKEEYIGSLR RKSSGFSRGV SKYRGVARHH HNGRWEARIG RVFGNKYLYL GTYATQEEAA 180 TAYDMAAIEY RGLNAVTNFD LSRYIKWLRP NQNTTNNPQP NPNHSVDLTN PSNEVGLGFL 240 YQQSSSFATE ATLVPPRPAG GATASSALGL LLQSSKFKEM LERTSVVDCP STPLESDPPR 300 SSFPDDIQTY FDCQDASSYG EGDDIIFGEL NSFASPMFQC ELDA

Sequence ? help Back to Top

Protein Sequence Length: 344 aa Download sequence

MAKISQKNTS NTSSNSKPAT KAKRTRKSVP RESPPQRSSI YRGVTRHRWT GRYEAHLWDK  60
NCWNESQKKK GRQVYLGAYD DEETAAHAYD MAALKYWGQD TILNFPLSTY QEELKGMESQ  120
SKEEYIGSLR RKSSGFSRGV SKYRGVARHH HNGRWEARIG RVFGNKYLYL GTYATQEEAA  180
TAYDMAAIEY RGLNAVTNFD LSRYIKWLRP NQNTTNNPQP NPNHSVDLTN PSNEVGLGFL  240
YQQSSSFATE ATLVPPRPAG GATASSALGL LLQSSKFKEM LERTSVVDCP STPLESDPPR  300
SSFPDDIQTY FDCQDASSYG EGDDIIFGEL NSFASPMFQC ELDA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G16060.1	1e-113	AP2 family protein