PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028051247.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family MIKC_MADS
Protein Properties Length: 243aa    MW: 27632.4 Da    PI: 9.0886
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028051247.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF99.81e-31959151
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    krienk+nrqvtf+kRrng+lKKA+ELSvLCdaeva+iifs++gklye++s
  XP_028051247.1  9 KRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCS 59
                    79***********************************************96 PP

2K-box82.59.7e-281011752599
           K-box  25 kkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 
                     k+++e Lqr+qR+llGedL++L+ keL+ Le+qL+ slk+iRs++++++l+q+ +lq+ke++l+e+nk+L+++l 
  XP_028051247.1 101 KARYEALQRSQRNLLGEDLGPLNSKELETLERQLDMSLKQIRSTRTQYMLDQLTDLQRKEHALSEANKSLKQRLV 175
                     899********************************************************************9875 PP

Sequence ? help Back to Top
Protein Sequence    Length: 243 aa     Download sequence    
MGRGRVELKR IENKINRQVT FAKRRNGLLK KAYELSVLCD AEVALIIFSN RGKLYEFCSS  60
SSMLKTLERY QKCNYGAPEP NVSTREALVT VLSHQGIFEA KARYEALQRS QRNLLGEDLG  120
PLNSKELETL ERQLDMSLKQ IRSTRTQYML DQLTDLQRKE HALSEANKSL KQRLVEGNQV  180
ISLQWNPSAQ DVGYSRQQAQ PQGDVFFHPL DCEPTLQIGY QNDPITVAAA GPSVNNYMPG  240
WLP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G24260.11e-123MIKC_MADS family protein