PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028051247.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 243aa MW: 27632.4 Da PI: 9.0886 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 99.8 | 1e-31 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krienk+nrqvtf+kRrng+lKKA+ELSvLCdaeva+iifs++gklye++s XP_028051247.1 9 KRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCS 59 79***********************************************96 PP | |||||||
2 | K-box | 82.5 | 9.7e-28 | 101 | 175 | 25 | 99 |
K-box 25 kkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 k+++e Lqr+qR+llGedL++L+ keL+ Le+qL+ slk+iRs++++++l+q+ +lq+ke++l+e+nk+L+++l XP_028051247.1 101 KARYEALQRSQRNLLGEDLGPLNSKELETLERQLDMSLKQIRSTRTQYMLDQLTDLQRKEHALSEANKSLKQRLV 175 899********************************************************************9875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 243 aa Download sequence |
MGRGRVELKR IENKINRQVT FAKRRNGLLK KAYELSVLCD AEVALIIFSN RGKLYEFCSS 60 SSMLKTLERY QKCNYGAPEP NVSTREALVT VLSHQGIFEA KARYEALQRS QRNLLGEDLG 120 PLNSKELETL ERQLDMSLKQ IRSTRTQYML DQLTDLQRKE HALSEANKSL KQRLVEGNQV 180 ISLQWNPSAQ DVGYSRQQAQ PQGDVFFHPL DCEPTLQIGY QNDPITVAAA GPSVNNYMPG 240 WLP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G24260.1 | 1e-123 | MIKC_MADS family protein |