PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc172706.1_g010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | WRKY | ||||||||
Protein Properties | Length: 135aa MW: 15160.1 Da PI: 9.8903 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 92.1 | 4.3e-29 | 61 | 117 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +DgynWrKYGqK+vk se++rsYY+Ct+++Cpvkkkver + v+ei+++g+Hnhe Cse_sc172706.1_g010.1 61 EDGYNWRKYGQKQVKRSEYTRSYYKCTHQSCPVKKKVERGV-GGLVTEIINKGKHNHE 117 8****************************************.9**************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 135 aa Download sequence |
RSLGMSHQQA LAHVTAKAAQ LQPIPTTHHR VPPPMPDHNV TMMAPDSHSH PPLVAADKPA 60 EDGYNWRKYG QKQVKRSEYT RSYYKCTHQS CPVKKKVERG VGGLVTEIIN KGKHNHEPPR 120 TVGNLNDIEP FNDQT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G13960.2 | 2e-37 | WRKY family protein |