PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc127579.1_g010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | LBD | ||||||||
Protein Properties | Length: 155aa MW: 17171.3 Da PI: 4.4437 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 35.7 | 2.5e-11 | 4 | 54 | 50 | 100 |
DUF260 50 peeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallkee 100 p + re a+ ++ yeA+ar+ +Pv+G+v++i +l q +++l+ el +++++ Cse_sc127579.1_g010.1 4 PVNCRELAVLTISYEAQARLANPVHGCVETIIALYQVVASLQMELLAVQTQ 54 56679999*************************************999987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 155 aa Download sequence |
LQLPVNCREL AVLTISYEAQ ARLANPVHGC VETIIALYQV VASLQMELLA VQTQLLNSRP 60 TVANTLHGSL QQPEPIQHFE LQPMYSIGSP ASTNNTINMY PSDSSLPNVA DCQNNVHLQP 120 SFHPFQLSRP QSQNGDKDEE NQEFVAFLDQ MLQSG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G03760.1 | 1e-21 | LBD family protein |