PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc092273.1_g010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | Nin-like | ||||||||
Protein Properties | Length: 153aa MW: 17532.4 Da PI: 10.9052 | ||||||||
Description | Nin-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | RWP-RK | 49.5 | 8.4e-16 | 28 | 77 | 3 | 50 |
RWP-RK 3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWP..hRkik 50 +++++ed++++ +pi +A+k Lgv+ ++LKriCR+++I+ WP +R +k Cse_sc092273.1_g010.1 28 ESVTMEDIQQNIGKPIGEASKRLGVSRSTLKRICRKLNIPSWPkpSRNMK 77 6899**************************************73356665 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 153 aa Download sequence |
MTFANLNFDA VAEEKRVSAK RRRKPKMESV TMEDIQQNIG KPIGEASKRL GVSRSTLKRI 60 CRKLNIPSWP KPSRNMKYKH LSIHVVVLLL VKVKRWSCSS NRHGFEARWW ICGKHSTFPY 120 LTIEALGSSM IASSSKESDD SIETLHPIPK RDL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G64530.1 | 8e-09 | Nin-like family protein |