PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc080046.1_g010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | FAR1 | ||||||||
Protein Properties | Length: 179aa MW: 20371 Da PI: 9.7798 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 30.6 | 1.1e-09 | 30 | 78 | 47 | 90 |
FAR1 47 k......tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 + ++k+ r+r++ r+gC +l+++k+ + +evtk+e HnH+l+ Cse_sc080046.1_g010.1 30 ShrfgdvKRKQTRKRTSFRCGCSTSLTINKK-GNIYEVTKFEDGHNHPLV 78 1445555567788999999*********999.9***************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 179 aa Download sequence |
QGLNEDSNGK SGDSVTDNDI SGQSEISDDS HRFGDVKRKQ TRKRTSFRCG CSTSLTINKK 60 GNIYEVTKFE DGHNHPLVAE KDMIFLKNSR KMGYTKQHFL YQVSNENFGP TVGFRLMKQV 120 YGGFDRVGAT VIDCKNQKKK ISVFIGDRDA QMAVEKLLSR KLHSPGFYVN YYKGWYCTL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 3e-09 | FAR1 family protein |