PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc073559.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

CPP

Protein Properties

Length: 385aa MW: 42637.6 Da PI: 8.8255

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc073559.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	47.2	4.5e-15	89	125	1	37
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCk 37 k++kgC+Ckks Clk+YCeCf+a+ Cse+CkC dCk Cse_sc073559.1_g010.1 89 KHNKGCHCKKSGCLKRYCECFQAQILCSENCKCMDCK 125 589*********************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 385 aa Download sequence
TFATFITLTT ILIHHRNHYR FHRSPPIIGV YCDGCNCVNC QNNVDNEPAR RGAIKSTLEL 60 NPQAFSPKIA QSPLGKCDNK EETGEVVAKH NKGCHCKKSG CLKRYCECFQ AQILCSENCK 120 CMDCKKFEGS QERQAIFRDP IHDVAYYQQA ANAARTNVAI TGVVGASGYG APLVGRKRKP 180 QDLFLVGSPA SRDSSFHSAA QFQQMNHVRG SAPLSTWPSV PGARIANNAS VVGGSKWQDN 240 QSYSQFIRGT GKVNLEVIKQ GIKIVQGQEQ GRTMVVQLPG EARWMITHCT NMFSFKGSSY 300 WMAPEVVMNT NGYNLAVDIW SLGCTILEMA TSKPPWGQYE GVAAIFKIGN CKDMSQFSFS 360 GHSHIPYSSF HNGFAFYITL YFLIN

Sequence ? help Back to Top

Protein Sequence Length: 385 aa Download sequence

TFATFITLTT ILIHHRNHYR FHRSPPIIGV YCDGCNCVNC QNNVDNEPAR RGAIKSTLEL  60
NPQAFSPKIA QSPLGKCDNK EETGEVVAKH NKGCHCKKSG CLKRYCECFQ AQILCSENCK  120
CMDCKKFEGS QERQAIFRDP IHDVAYYQQA ANAARTNVAI TGVVGASGYG APLVGRKRKP  180
QDLFLVGSPA SRDSSFHSAA QFQQMNHVRG SAPLSTWPSV PGARIANNAS VVGGSKWQDN  240
QSYSQFIRGT GKVNLEVIKQ GIKIVQGQEQ GRTMVVQLPG EARWMITHCT NMFSFKGSSY  300
WMAPEVVMNT NGYNLAVDIW SLGCTILEMA TSKPPWGQYE GVAAIFKIGN CKDMSQFSFS  360
GHSHIPYSSF HNGFAFYITL YFLIN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29000.1	5e-55	CPP family protein