PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc070149.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family FAR1
Protein Properties Length: 314aa    MW: 36066.7 Da    PI: 6.7139
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc070149.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR152.41.8e-1666182290
                   FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk...............................tekerrtraet 58 
                             Y++YA evGF vr+ ++++    g +++++f Cskeg+++ + k+                               +++ +r r+e 
  Cse_sc070149.1_g020.1  66 AYKDYAAEVGFIVRRGHQTND--GGIVMNKEFLCSKEGTKKVKVKEfdslkdncdankegtkkvkvkefdslkdncdAKSVKRIRSEF 151
                            5***************98877..999*******************9*****************************99888999999** PP

                   FAR1  59 rtgCkaklkvkkekdgkwevtkleleHnHela 90 
                             t+Cka++ v +   +k++v+++ +eHnH ++
  Cse_sc070149.1_g020.1 152 MTNCKARIYVVRF-GEKYRVKHFAEEHNHGFF 182
                            **********988.9**************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 314 aa     Download sequence    
MRQNCASNEF VEDENLSADV NVEENEEVNS PDFFTSTSIL IKPVVVKTLV PVEGTLFDSV  60
EEVYKAYKDY AAEVGFIVRR GHQTNDGGIV MNKEFLCSKE GTKKVKVKEF DSLKDNCDAN  120
KEGTKKVKVK EFDSLKDNCD AKSVKRIRSE FMTNCKARIY VVRFGEKYRV KHFAEEHNHG  180
FFTAEDRHLQ KSHRSMSLAH HYFAIKASNL NIGPCMSFNF IAELLGGYEN VGATKIDFKN  240
MSRDIYSYIG KYDAQMIIDK FSILKERDKN FTFEFKTNTD GQLSCLFWSD DTSKRNYEAF  300
GDVLSFDATY KTNM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.19e-22FAR1 family protein