PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc068749.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 850aa MW: 99529.6 Da PI: 8.2112

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc068749.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	33.3	1.5e-10	42	121	7	90
FAR1 7 AkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 A+ +GF ++k+ +k++ ng++++ +++C+k+g e + + +r+t+++++ +C +l+vk + + +w + HnHel Cse_sc068749.1_g010.1 42 ASGLGFVIVKKITKSE--NGQMMEINYMCTKSGIYEYHGSG---KRKTKTKKKSNCPFRLVVKYRPtRYNWILRVKCDSHNHELI 121 778999999876665..999*************9888...999**************9888898888889***96 PP

Sequence ? help Back to Top
Protein Sequence Length: 850 aa Download sequence
AFRFHEEVSE DCPFIRQEIN IASGLSAFRS HEEVTEWVQN IASGLGFVIV KKITKSENGQ 60 MMEINYMCTK SGIYEYHGSG KRKTKTKKKS NCPFRLVVKY RPTRYNWILR VKCDSHNHEL 120 IESLHGVPYA MRLKDDELSL VKELSEYSVP PRNILSTIKG RNPDNVSSVR TIYNALDKFR 180 RTRVGDRTQI QILYSHLTDS GYAYYPRVNE HNELEELFFV HPTSNALWRT FPEIMLMDST 240 YNTTMFKLPL LEIVGVTPTN KTFSMAYNFI HEQNLLKFMR NRCGGIDEYD SIKRRWDRLV 300 KAPTSRLFEQ QYERLQQRLV NHAPIAEYLD NWLRDYRHMF VSYITDEYRS FGQTTTCRVE 360 AHHALLKLYL GGTQSNLDRL LSAIDKIVFA QENAIKESFN RSIGEKINDC NILLFQELWY 420 KVSHHAFNLM QKELHLSITV ENCSHKLRTI YGLPCFHEMQ YYVYHGRPIP LEELNIFWRT 480 LHVPWPNINR PPPEDGSSSN DDDDDDDDDH HHHHHDTSFR DDIRQFKNVF TKASSFVKKN 540 MMTKLRSIYQ PASDDTREPV IQKNTRGRPS AKDKMGKATQ VPDLNEVPTV DHRRSTATRS 600 TQVPNFNKEP SRHSSFTGPS DHRRSTAIRH RLYDGDAESE MLMSMLPVLW YPYIISIYNV 660 VGDGNCGFRC VAHGVWEQQD WWRQVRQMLL QQMDLNWQVY MGLWGEDGFN ELRRTIDWSG 720 HGNAPPDRYM DMPNTGLVIA ELIRRPVAFI SHRSWNMCFP LISSPDFSQR TDPLVIARVG 780 NEVDQGNPFW CRCNRGFIIE RKSTKSFPGR PYYACPLSVP GTDDYGCRYF SWNDEFERRY 840 LSRASSSTQC

Sequence ? help Back to Top

Protein Sequence Length: 850 aa Download sequence

AFRFHEEVSE DCPFIRQEIN IASGLSAFRS HEEVTEWVQN IASGLGFVIV KKITKSENGQ  60
MMEINYMCTK SGIYEYHGSG KRKTKTKKKS NCPFRLVVKY RPTRYNWILR VKCDSHNHEL  120
IESLHGVPYA MRLKDDELSL VKELSEYSVP PRNILSTIKG RNPDNVSSVR TIYNALDKFR  180
RTRVGDRTQI QILYSHLTDS GYAYYPRVNE HNELEELFFV HPTSNALWRT FPEIMLMDST  240
YNTTMFKLPL LEIVGVTPTN KTFSMAYNFI HEQNLLKFMR NRCGGIDEYD SIKRRWDRLV  300
KAPTSRLFEQ QYERLQQRLV NHAPIAEYLD NWLRDYRHMF VSYITDEYRS FGQTTTCRVE  360
AHHALLKLYL GGTQSNLDRL LSAIDKIVFA QENAIKESFN RSIGEKINDC NILLFQELWY  420
KVSHHAFNLM QKELHLSITV ENCSHKLRTI YGLPCFHEMQ YYVYHGRPIP LEELNIFWRT  480
LHVPWPNINR PPPEDGSSSN DDDDDDDDDH HHHHHDTSFR DDIRQFKNVF TKASSFVKKN  540
MMTKLRSIYQ PASDDTREPV IQKNTRGRPS AKDKMGKATQ VPDLNEVPTV DHRRSTATRS  600
TQVPNFNKEP SRHSSFTGPS DHRRSTAIRH RLYDGDAESE MLMSMLPVLW YPYIISIYNV  660
VGDGNCGFRC VAHGVWEQQD WWRQVRQMLL QQMDLNWQVY MGLWGEDGFN ELRRTIDWSG  720
HGNAPPDRYM DMPNTGLVIA ELIRRPVAFI SHRSWNMCFP LISSPDFSQR TDPLVIARVG  780
NEVDQGNPFW CRCNRGFIIE RKSTKSFPGR PYYACPLSVP GTDDYGCRYF SWNDEFERRY  840
LSRASSSTQC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G15090.1	1e-06	FAR1 family protein