PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc064996.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

WRKY

Protein Properties

Length: 259aa MW: 28654.6 Da PI: 9.1553

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc064996.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	48.5	1.8e-15	185	225	19	59
SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 19 efprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 + +sYY+Ct +gC+v+k+ver ++dpk v++tYeg+Hnh+ Cse_sc064996.1_g010.1 185 KWRKSYYKCTIKGCNVRKHVERPSSDPKSVITTYEGKHNHQ 225 5568************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 259 aa Download sequence
MDNNKKSLPL STPYLRPTIS IPTSSSVDNL FTAPGETPGP MTLISNLFSE NDVGPDTRTF 60 SQLLAGLSPA TLLESPAQGS LGMSHRQALA HVTAQAAQLQ PIPTTHHHVP PPMPDHNFAT 120 KNQLYMHGFK SFILVEFIVA IIGHVWCRNI EVKGCDPVSS HRTLPDSRII VQATSKIDLL 180 NDGYKWRKSY YKCTIKGCNV RKHVERPSSD PKSVITTYEG KHNHQALVSK NSIHEPTNDN 240 TSQLKPNNPV GLLRLKEEQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G03340.1	7e-36	WRKY family protein