PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc060201.1_g020.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family WRKY
Protein Properties Length: 523aa    MW: 60492.8 Da    PI: 5.8677
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc060201.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY63.43.8e-20123183259
                            --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
                   WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                            dDg++WrKYGqKe+ ++++ r+YYrC+++   gC+++k+v++ +++p   +itY+ +H+++
  Cse_sc060201.1_g020.1 123 DDGHTWRKYGQKEIINARHKRNYYRCSHKfeqGCQATKQVQKIQDEPPKYKITYNRNHTCK 183
                            8***************************9999***************************96 PP

Sequence ? help Back to Top
Protein Sequence    Length: 523 aa     Download sequence    
MESFSWLESS PSAQIIESIP ELTYVKQWTD NISEIPWLSE NMEVDHATIN RVAVERLETF  60
SNTPSIKSNY NAVMNDASHL YTLDGYSSKD VKMVKPVKPI KSKRGCHIRS SSWTSTNITS  120
YTDDGHTWRK YGQKEIINAR HKRNYYRCSH KFEQGCQATK QVQKIQDEPP KYKITYNRNH  180
TCKILLSTPE IFLDSTNDND TSVLLSFENN GPSFSLDKHE EPNDGFSSLD SSYNQASSFD  240
YSLSHNLIMS DSSRPVSQIS SRLDHEEVIL TGVYSPIYER GGATGWRVEQ IWRRFSKNVS  300
PRFQKGEIQK GEDETDIDVD DTNERRLSWH SDMDNGRSQP VHPQPQQTPF PNQFYSQPSP  360
NQFYVSQPAS PHQYYQYNMA PPQMNPQHYN ITPTSEFSPF ENNDEDDEFV AETQQPPTEE  420
DEDEDVEEVD AGGKKKTFGG RRPREVWSPA QEEALAKAWI QISECNVIGN EQKAEGFWKR  480
VLEHYKATLG STSQTFHSLN TKWKTMNKIS RQLWVRLRKL FIR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.13e-29WRKY family protein