PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Cse_sc060201.1_g020.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
|
||||||||
Family | WRKY | ||||||||
Protein Properties | Length: 523aa MW: 60492.8 Da PI: 5.8677 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 63.4 | 3.8e-20 | 123 | 183 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 dDg++WrKYGqKe+ ++++ r+YYrC+++ gC+++k+v++ +++p +itY+ +H+++ Cse_sc060201.1_g020.1 123 DDGHTWRKYGQKEIINARHKRNYYRCSHKfeqGCQATKQVQKIQDEPPKYKITYNRNHTCK 183 8***************************9999***************************96 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 523 aa Download sequence |
MESFSWLESS PSAQIIESIP ELTYVKQWTD NISEIPWLSE NMEVDHATIN RVAVERLETF 60 SNTPSIKSNY NAVMNDASHL YTLDGYSSKD VKMVKPVKPI KSKRGCHIRS SSWTSTNITS 120 YTDDGHTWRK YGQKEIINAR HKRNYYRCSH KFEQGCQATK QVQKIQDEPP KYKITYNRNH 180 TCKILLSTPE IFLDSTNDND TSVLLSFENN GPSFSLDKHE EPNDGFSSLD SSYNQASSFD 240 YSLSHNLIMS DSSRPVSQIS SRLDHEEVIL TGVYSPIYER GGATGWRVEQ IWRRFSKNVS 300 PRFQKGEIQK GEDETDIDVD DTNERRLSWH SDMDNGRSQP VHPQPQQTPF PNQFYSQPSP 360 NQFYVSQPAS PHQYYQYNMA PPQMNPQHYN ITPTSEFSPF ENNDEDDEFV AETQQPPTEE 420 DEDEDVEEVD AGGKKKTFGG RRPREVWSPA QEEALAKAWI QISECNVIGN EQKAEGFWKR 480 VLEHYKATLG STSQTFHSLN TKWKTMNKIS RQLWVRLRKL FIR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G56400.1 | 3e-29 | WRKY family protein |