PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc059885.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

CAMTA

Protein Properties

Length: 619aa MW: 70201.1 Da PI: 4.7979

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc059885.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	123.2	1.2e-38	58	139	36	117
CG-1 36 sgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrrcywlLeeelekivlvhylev 117 sl++ +++r+frkDG++w++kkdgk v E+he+LKvg+ e+l+cyYahse+np+f+rrcyw+L++++e+ivlvhy+++ Cse_sc059885.1_g010.1 58 GKSLVIVYPRVLRFFRKDGHNWRRKKDGKNVGEAHERLKVGNDEALNCYYAHSEDNPHFRRRCYWMLDQTMEHIVLVHYRDT 139 457888899**********************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 619 aa Download sequence
MGATKVWVTT LENNSESDLG SWVLQSLAIT VAFKPIECLI CEYSGSVEGT SPCYIQQGKS 60 LVIVYPRVLR FFRKDGHNWR RKKDGKNVGE AHERLKVGND EALNCYYAHS EDNPHFRRRC 120 YWMLDQTMEH IVLVHYRDTT IGKHSVGPIS ASTLGSSNII QSSNNYATQP AASEFDETYN 180 NTPGLSFLDD SPGLLTNSNG ASRSSLTKII DEIDSSPEMV QLTSGDYISI SNHSGMNLKL 240 QDMLTYDGDP EYDGSLENYM YPSDTNEALL SQQQSDPVEE LRKHHSGDTG TSYECKDNAP 300 FAIKGLSNVN RTLQTIEIKV AKWVDWAYEA TIIEMETLVS LNFEIDENLF SHDSEHASNT 360 SEDDGNNYQK KKAKKKVPID NIDAISEERD EIFRLETLKA DLTKKVESET IHNSILKEEL 420 LSIKVALGDR HIALEQEVAT LKEQLQKERE LRKVLEAGLM MSKKILPLPG SIDDKTETEI 480 SRLQQIKSSK IMEVLMKKRA DLEQLCRQAR MPVVTNGAID FSVETLQSGA IDPLFLLEQV 540 ELQISNVKEE AFSRKDILEK TDKWLMIYPF NILSKLDEEQ EALMAIYGSE SGWVDARTHC 600 DGYIRREYIQ MIKDIFLKQ

Sequence ? help Back to Top

Protein Sequence Length: 619 aa Download sequence

MGATKVWVTT LENNSESDLG SWVLQSLAIT VAFKPIECLI CEYSGSVEGT SPCYIQQGKS  60
LVIVYPRVLR FFRKDGHNWR RKKDGKNVGE AHERLKVGND EALNCYYAHS EDNPHFRRRC  120
YWMLDQTMEH IVLVHYRDTT IGKHSVGPIS ASTLGSSNII QSSNNYATQP AASEFDETYN  180
NTPGLSFLDD SPGLLTNSNG ASRSSLTKII DEIDSSPEMV QLTSGDYISI SNHSGMNLKL  240
QDMLTYDGDP EYDGSLENYM YPSDTNEALL SQQQSDPVEE LRKHHSGDTG TSYECKDNAP  300
FAIKGLSNVN RTLQTIEIKV AKWVDWAYEA TIIEMETLVS LNFEIDENLF SHDSEHASNT  360
SEDDGNNYQK KKAKKKVPID NIDAISEERD EIFRLETLKA DLTKKVESET IHNSILKEEL  420
LSIKVALGDR HIALEQEVAT LKEQLQKERE LRKVLEAGLM MSKKILPLPG SIDDKTETEI  480
SRLQQIKSSK IMEVLMKKRA DLEQLCRQAR MPVVTNGAID FSVETLQSGA IDPLFLLEQV  540
ELQISNVKEE AFSRKDILEK TDKWLMIYPF NILSKLDEEQ EALMAIYGSE SGWVDARTHC  600
DGYIRREYIQ MIKDIFLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67310.1	2e-35	CAMTA family protein