PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc055936.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 245aa MW: 28434.8 Da PI: 6.7162

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc055936.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	80.7	2.5e-25	74	163	1	89
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnH 87 +fYneY+ GF +rk++ ++ +++e+++r f C+keg+++ ++k+ +++ ++r trtgCka ++v+++++g+w+v+k++ eHnH Cse_sc055936.1_g020.1 74 NFYNEYGLFKGFGIRKHQLNRCIDTNEVYRRVFSCNKEGFKDMNDKRqLRDNVKRRCITRTGCKALMQVTLSSQGEWVVDKFSDEHNH 161 6***************************************99988467778899****************************** PP FAR1 88 el 89 ++ Cse_sc055936.1_g020.1 162 PF 163 98 PP

Sequence ? help Back to Top
Protein Sequence Length: 245 aa Download sequence
MSSSMTFSRS DPNHEEQIIS DGNTDDFEHT LIDDIDNNGY LIQEEVTDLT HIYDRSLRYT 60 ILGRTFATSD DAYNFYNEYG LFKGFGIRKH QLNRCIDTNE VYRRVFSCNK EGFKDMNDKR 120 QLRDNVKRRC ITRTGCKALM QVTLSSQGEW VVDKFSDEHN HPFDSPSKVI KQRSHSIFHR 180 SNECKDVVTL LSKAGMKPSE ITKIVNAFRG GEEDQLTRVQ WMKPSEIIKI VNAFRGGEED 240 QLTRV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-21	FAR1 family protein