PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc053945.1_g010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | ERF | ||||||||
Protein Properties | Length: 195aa MW: 22303.8 Da PI: 4.5582 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 56.9 | 5.1e-18 | 55 | 104 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GVr +++g+++AeIrd + ng +r++lg+f+t+eeAa a+++a+ +g Cse_sc053945.1_g010.1 55 YRGVR-PRRWGKYAAEIRDSTRNG--ARVWLGTFDTPEEAALAYDQAAFVARG 104 9***9.556**********44465..*********************987776 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 195 aa Download sequence |
MDSSYLAYNT SNQYLPFNEN DADEMALYGM LAESSYNDQD LSNQTTYSPA TKINYRGVRP 60 RRWGKYAAEI RDSTRNGARV WLGTFDTPEE AALAYDQAAF VARGQLAILN FPVETVYESL 120 RAMDYRFEEG TSPVLALKKC HTMNKKAMAR EKKRKEVKLD DQDTNKNVVV FEDLGADYLE 180 EILCLSESSE YFGSW |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G23240.1 | 8e-55 | ERF family protein |