PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc053684.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

E2F/DP

Protein Properties

Length: 464aa MW: 51392.5 Da PI: 5.0572

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc053684.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	82.7	3e-26	141	206	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 r+++sL+llt+kf++l+ ++e gi++ln++a++L dv ++RRiYDi+NVLe+++l+ek+ kn+irwkg Cse_sc053684.1_g010.1 141 RYDNSLGLLTKKFIHLITHAEGGILDLNNAAETL---DV--QKRRIYDITNVLEGIGLVEKTLKNRIRWKG 206 689*****************************.....****************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 464 aa Download sequence
MSDSGPSNCQ SDSTSVGGRG PIPHPVRRHL AMHSSKPPFV PTDDYYRFST GNDGKRSDQS 60 DEVIIVKSPV PVKRKLGTSY IEISSSPSYA STVNSPVHTP VSGNGGKVTS RAKATKSNRS 120 VPPSPIGNAG SPSPLTPAGN RYDNSLGLLT KKFIHLITHA EGGILDLNNA AETLDVQKRR 180 IYDITNVLEG IGLVEKTLKN RIRWKGLDAS KPEELKDDVN LLQAEVQRLT MEESRLDERI 240 REMQERMRDM SEDDNKQKWL FVTEDDIKTR PCFQVKLLWH NETLIAIKAP HGTTLEVPDP 300 DEAVDYPQRR YRIILRSTMG PIDVYLVSQF EEKFEDVDGV EQHAPMPVAS SSGSSDNPAT 360 EPTIVANAGM EVEVHPQPVQ NMSSGHNIPH DSPGRITKIV PSDVNIDTDY WLLSDKEVPL 420 TDMWNTDLAD MQWDGVDLLA EEFCLADVTQ LSDAPSTSLN PTHR

Sequence ? help Back to Top

Protein Sequence Length: 464 aa Download sequence

MSDSGPSNCQ SDSTSVGGRG PIPHPVRRHL AMHSSKPPFV PTDDYYRFST GNDGKRSDQS  60
DEVIIVKSPV PVKRKLGTSY IEISSSPSYA STVNSPVHTP VSGNGGKVTS RAKATKSNRS  120
VPPSPIGNAG SPSPLTPAGN RYDNSLGLLT KKFIHLITHA EGGILDLNNA AETLDVQKRR  180
IYDITNVLEG IGLVEKTLKN RIRWKGLDAS KPEELKDDVN LLQAEVQRLT MEESRLDERI  240
REMQERMRDM SEDDNKQKWL FVTEDDIKTR PCFQVKLLWH NETLIAIKAP HGTTLEVPDP  300
DEAVDYPQRR YRIILRSTMG PIDVYLVSQF EEKFEDVDGV EQHAPMPVAS SSGSSDNPAT  360
EPTIVANAGM EVEVHPQPVQ NMSSGHNIPH DSPGRITKIV PSDVNIDTDY WLLSDKEVPL  420
TDMWNTDLAD MQWDGVDLLA EEFCLADVTQ LSDAPSTSLN PTHR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G36010.1	1e-139	E2F/DP family protein