PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc052566.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family B3
Protein Properties Length: 330aa    MW: 37752.8 Da    PI: 8.454
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc052566.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3505.4e-161021831093
                            HHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE...EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS
                     B3  10 vlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliy.rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 
                            ++++  ++lp+ f+e+ g++  +++ ++++d +g +W++ + + r ++ ++ l++GW++F +  +L +gD++ Fk+d++ e++l+
  Cse_sc052566.1_g010.1 102 NTQRYAMILPRVFVEAAGLE--NKTIIKMKDHEGYEWRIGILVeRYNRTKHSLSAGWSKFRQHCNLADGDVCFFKYDKK-EGTLN 183
                            4445569*******999988..5569***************885666666**************************985.44443 PP
Sequence ? help Back to Top
Protein Sequence    Length: 330 aa     Download sequence    
MSRNPTLKTA SGDYSWSVEI KRIGEDYCFA NGWEKVAQDV QLCIKDIVVF WLADAYTIQV  60
TFFGADGCEK KLALIKSNNG HDVVDEAMED EDLSFQKVIR VNTQRYAMIL PRVFVEAAGL  120
ENKTIIKMKD HEGYEWRIGI LVERYNRTKH SLSAGWSKFR QHCNLADGDV CFFKYDKKEG  180
TLNLTQVIKS KRSTTNAVDA VRIEDECSPT DKPSDGAKVS VECESGRELD MAQRKMGRPL  240
LNGGTDVKNK DEWYVEAITM RKKRRLLEKN EQERERVVRS NQLSMFDGGI RDANAGKRQI  300
SGLIGWKNEE NDNIRKTVMR KGRDDVTTRS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24700.14e-10B3 family protein