PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc052480.1_g010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | WRKY | ||||||||
Protein Properties | Length: 142aa MW: 16236.1 Da PI: 9.6289 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 36.9 | 7.2e-12 | 108 | 130 | 1 | 23 |
---SS-EEEEEEE--TT-SS-EE CS WRKY 1 ldDgynWrKYGqKevkgsefprs 23 l+Dgy+WrKYGqK vkg+ +pr+ Cse_sc052480.1_g010.1 108 LNDGYKWRKYGQKAVKGNSNPRQ 130 58*******************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 142 aa Download sequence |
RGVDGLVTEI IYKGKHNHQP PRTVGNFNDT EPFNDQTSYF NYSRENSSIK KDQESSHEML 60 GSWDNDDVAK HQVKKRNIEV KGCDPVSSHR TLPDSRIIVQ ATSKIDLLND GYKWRKYGQK 120 AVKGNSNPRQ VSPLFKFTID SL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G03340.1 | 9e-33 | WRKY family protein |