PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc051912.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

C2H2

Protein Properties

Length: 516aa MW: 58251.4 Da PI: 6.7365

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc051912.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	20.4	1.3e-06	276	297	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 C +Cgk F+r nL+ H+r H Cse_sc051912.1_g010.1 276 FCVICGKGFKRDANLRMHMRGH 297 6*******************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 516 aa Download sequence
MACRHYRASR FCEAFTGHAI FLNLIKKMDA RKKHLASLDP WSNYDDLNQQ QQQMANSSNL 60 DYDAMIRKQM ETIPLTQMNF IQQQHQQLLE QLLEVNDKTP SQLWDPETML SNLNVMEQKI 120 HQLQELVQLI VGKSSMDQPN QLLIQQQQLV TADLTSIIIQ LISTAGSLLP SVKHPHFPPN 180 TIPNPSVGNG VNVSDNICND NINTNSNSNN CNNYSDSNTT HRNMVSKVED QSHDTDHMDT 240 HEEHEDDVDE GEHLPPGSYE ILQLEKEEIL APHTHFCVIC GKGFKRDANL RMHMRGHGDE 300 YKTAAALAKP HKEMGSEPKL IKRYSCPYLG CKRNKDHKKF QPLKTILCVK NHYKRTHCDK 360 SYTCSRCNTK KFSVIADLKT HEKHCGRDRW LCSCGTTFSR KDKLFGHISL FQGHTPAIPL 420 DEPKGGPVGV QEQGDTNNNN TEGPKDVGFF DFNFNSNGAS GSGVQIGGEP NVCFSPMNGF 480 QEFPRSLFEE SDSLSFLLSS GSYLWKNGGE SSSKDL

Sequence ? help Back to Top

Protein Sequence Length: 516 aa Download sequence

MACRHYRASR FCEAFTGHAI FLNLIKKMDA RKKHLASLDP WSNYDDLNQQ QQQMANSSNL  60
DYDAMIRKQM ETIPLTQMNF IQQQHQQLLE QLLEVNDKTP SQLWDPETML SNLNVMEQKI  120
HQLQELVQLI VGKSSMDQPN QLLIQQQQLV TADLTSIIIQ LISTAGSLLP SVKHPHFPPN  180
TIPNPSVGNG VNVSDNICND NINTNSNSNN CNNYSDSNTT HRNMVSKVED QSHDTDHMDT  240
HEEHEDDVDE GEHLPPGSYE ILQLEKEEIL APHTHFCVIC GKGFKRDANL RMHMRGHGDE  300
YKTAAALAKP HKEMGSEPKL IKRYSCPYLG CKRNKDHKKF QPLKTILCVK NHYKRTHCDK  360
SYTCSRCNTK KFSVIADLKT HEKHCGRDRW LCSCGTTFSR KDKLFGHISL FQGHTPAIPL  420
DEPKGGPVGV QEQGDTNNNN TEGPKDVGFF DFNFNSNGAS GSGVQIGGEP NVCFSPMNGF  480
QEFPRSLFEE SDSLSFLLSS GSYLWKNGGE SSSKDL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G34370.2	1e-145	C2H2 family protein